Human calicivirus
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Complete norovirus genomes

KT732274	GII.3
	GII.P12

Length: 3,251 | 3 CDS

ORF1: 1..775
ORF2: 756..2402
ORF3: 2402..3166
LOCUS       KT732274                3251 bp    RNA     linear   VRL 19-SEP-2016
DEFINITION  Norovirus GII.3 isolate 15-DD-3/2015/GII.3 ORF1 gene, partial cds;
            and VP1 and VP2 genes, complete cds.
ACCESSION   KT732274
VERSION     KT732274.1
KEYWORDS    .
SOURCE      Norovirus GII.3
  ORGANISM  Norovirus GII.3
            Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
            Picornavirales; Caliciviridae; Norovirus; Norwalk virus.
REFERENCE   1  (bases 1 to 3251)
  AUTHORS   Wu,F.-T., Chang,C.-Y. and Wu,C.-Y.
  TITLE     Norovirus gastroenteritis outbreaks
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3251)
  AUTHORS   Wu,F.-T., Chang,C.-Y. and Wu,C.-Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2015) Centers for Disease Control Department of
            Health, Center for Research and Diagnostics, No. 161, Kun-Yang
            Street, Taipei, Taiwan 115, Republic of China
FEATURES             Location/Qualifiers
     source          1..3251
                     /organism="Norovirus GII.3"
                     /mol_type="genomic RNA"
                     /isolate="15-DD-3/2015/GII.3"
                     /isolation_source="stool specimen from a 8-year male with
                     diarrhea"
                     /host="Homo sapiens"
                     /db_xref="taxon:490041"
                     /country="Taiwan"
                     /collection_date="Apr-2015"
                     /note="genotype: GII.3"
     CDS             <1..775
                     /note="nonstructural protein"
                     /codon_start=2
                     /product="ORF1"
                     /protein_id="AOO95011.1"
                     /translation="VLAAALEIMVKFSPEPHLAQKVAEDLLSPSVMDVGDFKISINEG
                     LPSGVPCTSQWNSIAHWLLTLCALSEVTNLSPDIIQANSLFSFYGDDEIVSTDIKLDP
                     EKLTAKLKEYGLKPTRPDKTEGPLVISKDLNGLTFLRRTVTRDPAGWFGKLEQSSILR
                     QMYWTRGPNHEDPSETMIPHSQRPIQLMSLLGEAALHGPAFYSKISKLVIAELKEGGM
                     DFYVPRQEPMFRWMRFSDLSTWEGDRNLAPSFVNEDGVE"
     CDS             756..2402
                     /note="major structural protein"
                     /codon_start=1
                     /product="VP1"
                     /protein_id="AOO95012.1"
                     /translation="MKMASNDATPSNDGAAGLVPEINNEAMALDPVAGAAIAAPLTGQ
                     QNIIDPWIMNNFVQAPGGEFTVSPRNSPGEVLLNLELGPEINPYLAHLARMYNGYAGG
                     FEVQVVLAGNAFTAGKIIFAAIPPNFPIDNLSAAQITMCPHVIVDVRQLEPVNLPMPD
                     VRNNFFHYNQGSDSRLRLVAMLYTPLRANNSGDDVFTVSCRVLTRPSPEFSFNFLVPP
                     TVESKTKLFTLPILTISEMSNSRFPVPIDSLHTSPTENIVVQCQNGRVTLDGELMGTT
                     QLLPSQICAFRGVLTRSTSRASDQADTATPRLFNYYWHIQLDNLNGTPYDPAEDIPGP
                     LGTPDFRGKVFGVASQRNPDSTTRAHEAKVDTTSGRFTPKLGSLEISTESGDFDQNQP
                     TRFTPVGIGVDSEADFQQWSLPDYSGQFTHNMNLAPAVAPNFPGEQLLFFRSQLPSSG
                     GRSNGILDCLVPQEWVQHFYQESAPAQTQVALVRYVNPDTGRVLFEAKLHKLGFMTIA
                     KNGDSPITVPPNGYFRFESWVNPFYTLAPMGTGNGRRRVQ"
     CDS             2402..3166
                     /note="minor structural protein"
                     /codon_start=1
                     /product="VP2"
                     /protein_id="AOO95013.1"
                     /translation="MAGAFIAGLAGDIFTNTVGSLVNAGANAINQKVDFENNKYLQNA
                     SFNHDKEMLNAQIEATKRLQADMIAIKQGVLTAGGFSPTDAARGAINAPMTKVLDWNG
                     TRYWAPSATSTTSMSGGFTNQAVHRTMPNFKMNQAPKSTPSSGFSVRSLSTQVTSLSS
                     HSSGSSRSSGSTVASSLPSSNRTRDWVNQQNFNLEPHMPGSLRTAFVTPPSSTASSSG
                     TVSTVPKNVLDSWTSAFNTRRQPLFAYLRRRGESNV"
ORIGIN      
        1 cgtgttggca gcagccttag aaatcatggt caagttttcc ccagagccgc acctggccca
       61 aaaggttgca gaagaccttc tttctcccag cgtgatggac gtaggtgatt tcaaaatatc
      121 aatcaatgag ggtctcccct ccggagtgcc ctgcacctcc caatggaatt ccatcgccca
      181 ctggctcctc actctctgtg cactctccga agttacaaac ctgtcccctg acattattca
      241 ggccaactct ctcttttctt tctacggtga tgatgaaatt gtgagtacag acataaaatt
      301 ggacccggaa aaactgacag caaaacttaa ggaatacggg ttgaaaccga cccgccctga
      361 caagactgaa ggacctcttg tcatttccaa agacctgaat ggcctaacct tcctgcggag
      421 gaccgtaact cgcgacccag caggctggtt tggaaagttg gaacagagct caatactcag
      481 acaaatgtac tggactaggg gccccaacca tgaagatcca tctgaaacaa tgataccaca
      541 ctcccagagg cccatacaat tgatgtcttt gctgggtgag gcagcactcc acggcccagc
      601 attctacagc aaaatcagta aactggtcat tgcagagttg aaggaaggtg gcatggattt
      661 ttacgtgcca agacaagagc caatgttcag atggatgaga ttctcggatc tgagcacgtg
      721 ggagggcgat cgcaatctgg ctcccagttt tgtgaatgaa gatggcgtcg aatgacgcca
      781 ccccatctaa tgatggtgcc gccggcctcg tcccagagat caacaatgag gcaatggcgc
      841 tagatccagt ggcgggtgca gcgatagcag cacccctcac tggccagcaa aatataattg
      901 atccctggat tatgaataat tttgtgcaag cacctggtgg tgagttcaca gtgtctccta
      961 ggaattcccc tggtgaagtg ctcctcaatt tggaattggg cccagagata aacccctatc
     1021 tggcccatct tgctagaatg tataatggtt atgcaggtgg gtttgaagtg caggtagtcc
     1081 tagctggaaa tgcgtttaca gcaggaaaga taatctttgc agctataccc cctaacttcc
     1141 caattgataa tctaagtgca gcacagatca caatgtgccc acatgtgatt gtggatgtca
     1201 ggcagttgga accggtcaac ctcccgatgc ctgacgttcg caataacttc ttccactaca
     1261 accaagggtc tgattcgaga ttgcgcttgg ttgcaatgct gtacacacct cttagggcaa
     1321 ataactctgg ggatgatgtt ttcactgtgt cttgtagagt gctgactaga cctagccctg
     1381 aattttcatt taacttcctt gtgccaccta ctgtggagtc aaagacaaaa ctcttcaccc
     1441 tcccaattct gactatctct gaaatgtcta attctaggtt tccagtgccg attgattctc
     1501 tgcacaccag cccaactgag aacattgttg tccaatgcca aaatggacgc gtcactcttg
     1561 atggtgagtt gatgggcacc actcagctct tacctagtca aatctgtgct ttcaggggcg
     1621 tgctcactag atcaacaagc agggctagtg accaggccga cacagcaacc cctagattgt
     1681 ttaattatta ttggcacata caattggata atctaaatgg gactccttat gatcctgcag
     1741 aagacatacc aggtcccctg gggacaccag atttccgggg caaagtcttt ggcgtggcca
     1801 gccaaagaaa ccccgacagt acaactagag cacatgaagc gaaggtggac acaacatctg
     1861 gtcgcttcac cccaaaacta ggctcattag agatatccac tgaatctggt gactttgacc
     1921 aaaaccaacc aacaagattc accccagttg gcattggggt tgacagcgag gcagacttcc
     1981 aacaatggtc cttacccgac tactctggcc agttcactca caacatgaac ttagccccag
     2041 ctgttgctcc caacttccct ggtgagcagc tccttttctt ccgctcacag ttaccatctt
     2101 ctggtgggcg atccaatggg attctagact gcctggtccc ccaagaatgg gttcagcact
     2161 tttaccaaga atcagccccc gcccaaaccc aggtggctct ggttagatat gtcaaccctg
     2221 acactggtag agtgttgttt gaggccaagc tgcacaaatt aggtttcatg actatagcta
     2281 agaatggtga ctctccaata actgtccccc caaatggata ctttaggttt gaatcttggg
     2341 tgaacccatt ttatacactt gcccccatgg gaactgggaa tgggcgtaga agagttcaat
     2401 aatggctgga gcttttatag caggattagc tggtgatata tttacaaata ctgtagggtc
     2461 tctagttaat gcaggggcta atgctattaa tcaaaaagtt gattttgaaa ataataaata
     2521 tttacaaaat gcttccttca atcatgataa ggaaatgtta aatgcacaga ttgaggcaac
     2581 aaagaggtta caggctgaca tgattgccat caaacagggg gttttgaccg ctggcggctt
     2641 ttcccccacc gatgcagctc gcggggcaat taatgccccc atgacaaaag tcctagattg
     2701 gaatggaaca aggtactggg caccaagtgc cacctctaca acctcgatgt cgggtggctt
     2761 cacaaaccag gctgtgcaca gaaccatgcc aaattttaaa atgaaccagg cccccaaatc
     2821 cacacccagc agtgggtttt cagtgaggtc actctcaacc caagtcacta gtctgagctc
     2881 acactcgtcc gggtcgtctc gatccagcgg gtctacagtt gctagctcat taccatcctc
     2941 taacaggact agggactggg tcaatcagca aaatttcaat ttggaaccac acatgcctgg
     3001 gtcacttagg acggcttttg tcactccacc atctagtaca gcctctagtt caggcactgt
     3061 ctcaaccgtg cccaaaaatg ttttggactc ctggacatct gcgtttaaca cgcgcaggca
     3121 gccgctattc gcataccttc gtagaagggg ggagtcaaat gtttagtgaa aaggttattt
     3181 taaatttgat ttaaattgga tttgatttgg aatcttttaa aaaaaaaaaa aaaaaaaaaa
     3241 aaaaaaaaaa a
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