Human calicivirus
Typing tool

Reference sequences

Norovirus (239) Sapovirus (130)
polymerase (RdRp) - 167 capsid (VP1) - 235 capsid (VP1)
1 GI.P1
 (4)		 Gothenburg_EU085529   1 GI.1
 (4)		 Gothenburg_EU085529   1 GI.1
 (19)		 Chanthaburi74_AY646854
2 Norwalk_M87661   2 Norwalk_M87661   2 Dresden_AY694184
3 SRSV-KY-8989J_L23828   3 SRSV-KY-8989J_L23828   3 Hunan_KX980412
4 V1622-06_AB447406   4 V1622-06_AB447406   4 Lima_1845_MG012398
5 GI.P2
 (2)		 Leuven_FJ515294   5 GI.2
 (3)		 Constellation59_AF435807   5 Lima_1863_MG012439
6 Southampton_L07418   6 Leuven_FJ515294   6 Lima_1870_MG012436
7 GI.P3
 (3)		 CHDC116_JX846929   7 Southampton_L07418   7 Manchester_X86560
8 ShimizuKK2866_KJ196292   8 GI.3
 (16)		 Akabane991130_EF547396   8 Mc114_AY237422
9 VA98115_AY038598   9 Beijing54108_GQ856470   9 N21_AY237423
10 GI.P4
 (4)		 Beijing55169_GQ856475   10 Beijing54114_GQ856471   10 Nashville_9427_MG012397
11 Chiba407_AB042808   11 Beijing54660_GQ856472   11 Nashville_9432_MG012437
12 Groningen_LN854563   12 Beijing55042_GQ856473   12 Nashville_9478_MG012438
13 Queensarmsleeds92_AJ313030   13 CHDC116_JX846929   13 Nashville_9491_MG012400
14 GI.P5
 (2)		 AppalachicolaBay318_AF414406   14 DesertShield395_U04469   14 Nashville_9691-1_MG012435
15 Siklos-HUN5407_KJ402295   15 Muenster702_KM289169   15 NongKhai50_AY646853
16 GI.P6
 (2)		 14-BC-1_KP027330   16 OS-32_LC122713   16 Portland_3639_MG012399
17 BS5(Hesse)_AF093797   17 Otofuke_AB187514   17 SapporoMT-2010_HM002617
18 GI.P7
 (3)		 AlbertaEI404_KU311161   18 Potsdam196_AF439267   18 SeoulROK62_KP298674
19 LillaEdetS5b_JN603251   19 ShimizuKK2866_KJ196292   19 Zhejiang1_KT327081
20 Providence_JN899243   20 Stavanger_AF145709   20 GI.2
 (7)		 BE-HPI01_JX993277
21 GI.P8
 (2)		 KolkataL8775_AB290150   21 V170707_AB447414   21 BR-DF01_AB614356
22 NagoyaKY531_KJ196298   22 VA98115_AY038598   22 Nashville_9411_MG012440
23 GI.P9
 (3)		 CAIQ12110628_KF586507   23 Vesoul576_EF529738   23 Oakland_3023_MG012442
24 LillaEdetS48_JN183159   24 GI.4
 (5)		 Beijing55169_GQ856475   24 Oakland_6371_MG012441
25 Vancouver730_HQ637267   25 Chiba407_AB042808   25 Parkville_U73124
26 GI.P10
 (2)		 Beijing55042_GQ856473   26 Groningen_LN854563   26 Potsdam_AF294739
27 DesertShield395_U04469   27 Koblenz433_AF394960   27 GI.3
 (4)		 Chiba010658_AJ606696
28 GI.P11
 (3)		 Beijing53997_GQ856463   28 Queensarmsleeds92_AJ313030   28 OB2015_1927_MG012401
29 Beijing55063_GQ856464   29 GI.5
 (6)		 AppalachicolaBay318_AF414406   29 OH08021_AB623037
30 Hiroshima48-938_AB354289   30 Musgrove_AJ277614   30 Stockholm318_AF194182
31 GI.P12
 (2)		 SzUG1_AB039774   31 OC020180_LC101825   31 GI.4 Chiba000496_AJ606693
32 Yiwu-CB1_MH443711   32 Siklos-HUN5407_KJ402295   32 GI.5
 (3)		 Ehime2K-814_AJ606698
33 GI.P13
 (4)		 Beijing54108_GQ856470   33 SzUG1_AB039774   33 Ehime643_DQ366345
34 Beijing54114_GQ856471   34 Yiwu-CB1_MH443711   34 Yokote1_AB253740
35 Beijing54660_GQ856472   35 GI.6
 (9)		 14-BC-1_KP027330   35 GI.6
 (4)		 Chiba000764_AJ606694
36 Vesoul576_EF529738   36 BS5(Hesse)_AF093797   36 Nashville_9367_MG012443
37 GI.P14
 (2)		 Muenster702_KM289169   37 Beijing53997_GQ856463   37 Nichinan_AB455803
38 Otofuke_AB187514   38 Beijing55063_GQ856464   38 Tokyo08-2439_AB622435
39 GI.PNA1 WUG1_AB081723   39 Hiroshima48-938_AB354289   39 GI.7
 (2)		 D1714_AB522390
40 GI.PNA2
 (2)		 Dhaka1882_MH130046   40 No20-Saitama-98-17_LC342057   40 Ehime041680_AB258428
41 NizhnyNovgorod_FJ383816   41 Sindlesham_AJ277615   41 GII.1
 (16)		 Bristol_AJ249939
42 GI.PNA3 V170707_AB447414   42 VA497_AF538678   42 Chiba020003_AJ606692
43 GI.PNA4 No20-Saitama-98-17_LC342057   43 WUG1_AB081723   43 Ehime2K-1948_AJ786351
44 GII.P1 Hawaii_U07611   44 GI.7
 (8)		 AlbertaEI404_KU311161   44 London29845_U95645
45 GII.P2
 (2)		 MK04_DQ456824   45 Chiba030100_AJ844469   45 Lyon598_AJ271056
46 Melksham_X81879   46 Dhaka1882_MH130046   46 Mc2_AY237419
47 GII.P3
 (3)		 Amsterdam1_KJ194500   47 IF2036_AY675555   47 Nashville_9343_MG012444
48 MX_U22498   48 LillaEdetS5b_JN603251   48 Nashville_9346_MG012445
49 Toronto_U02030   49 NizhnyNovgorod_FJ383816   49 Nashville_9353_MG012404
50 GII.P4 Den Haag
 (2)		 DenHaag_EF126965   50 Providence_JN899243   50 Nashville_9360_MG012402
51 Shimane2_AB541348   51 Winchester_AJ277609   51 Nashville_9385_MG012409
52 GII.P4 Farmington Hills
 (2)		 FarmingtonHills_AY502023   52 GI.8
 (2)		 Boxer_AF538679   52 Nashville_9422_MG012403
53 Langen1061_AY485642   53 NagoyaKY531_KJ196298   53 Nashville_9510_MG012406
54 GII.P4 Hunter
 (2)		 Chiba04-1008_AB220926   54 GI.9
 (3)		 CAIQ12110628_KF586507   54 Nashville_9511_MG012405
55 Hunter504D04O_DQ078814   55 LillaEdetS48_JN183159   55 Nashville_9525_MG012407
56 GII.P4
New Orleans
 (3)		 Hokkaido3_AB933767   56 Vancouver730_HQ637267   56 Nashville_9691-2_MG012408
57 NSW001P_GQ845367   57 GI.ancestral Tokyo45-5_AB684696   57 GII.2
 (8)		 Chiba990727_AJ606689
58 NewOrleans_GU445325   58 GII.1
 (5)		 Amsterdam3_KJ194507   58 Mc10_AY237420
59 GII.P4 US95-96
 (2)		 Saitama_AB112306   59 Ascension208_JN797508   59 Mex340_AF435812
60 US95-96_AF414424   60 Dillingen391_AF425767   60 Nashville_9331_MG012411
61 GII.P4 Yerseke
 (2)		 Isumi060936_AB294790   61 Hawaii_U07611   61 Nashville_9393_MG012412
62 Yerseke_EF126963   62 Picton_AY919139   62 Nashville_9521_MG012410
63 GII.P5 SaitamaT52_KJ196288   63 GII.2
 (12)		 E3_AY682552   63 Nashville_9795_MG012413
64 GII.P6
 (2)		 GZ2010-L96Guangzhou_JX989075   64 HenrytonSP17_MF405169   64 Siaya2158_MH922774
65 SaitamaU16_AB039778   65 KL109_JX846925   65 GII.3
 (13)		 13-3-2_KM092509
66 GII.P7
 (18)		 14-55_KX158281   66 MK04_DQ456824   66 20082029_AB630068
67 236_MH218692   67 Melksham_X81879   67 C12_AY603425
68 30443_KM198534   68 OC97007_AB089882   68 Chiba040507_AJ786350
69 Beijing55028_GQ856465   69 OsakaNI_DQ366347   69 Kushiro5_AB455793
70 Belgium-4_MN248516   70 PontdeRoide673_AY682549   70 Leon_6701_MG012414
71 GoulburnValleyG5175C_DQ379715   71 SaitamaE24_KF730316   71 Leon_6708_MG012416
72 Gwynedd273_AF414409   72 SantaRosa1764_KY865306   72 Lima_1856_MG012417
73 Maizuru8533_GU017903   73 SnowMountain_AY134748   73 Nashville_9354_MG012419
74 Miami292_AF414410   74 Vaals_AB281090   74 Nashville_9513_MG012418
75 OC071182007_AB542917   75 GII.3
 (13)		 109_MH218579   75 Nashville_9517_MG012415
76 PV-Voelk0017_KM289171   76 Amsterdam1_KJ194500   76 Nayoro4_AB455794
77 S9c_KC576910   77 Arg320_AF190817   77 Sydney53_DQ104360
78 Saga8610_GU594162   78 HK71_JX846924   78 GII.4
 (3)		 Kumamoto6_AB429084
79 SaitamaU4_AB039777   79 Herzberg385_AF539439   79 Lima_1873_MG012446
80 SendaiYG99_KJ196278   80 IPH2172-09VG4_JF697282   80 PHL-TGO12-028_KP067444
81 TAKAsanKimchi_KJ196295   81 MX_U22498   81 GII.5
 (6)		 Cruiseship_AY289804
82 TCHE99-13646_GU930737   82 Milwaukee009_JN565063   82 Lima_1868_MG012451
83 VA97207_AY038599   83 NSW730O_KT239614   83 Nashville_9349_MG012447
84 GII.P8
 (2)		 CHDC3936_JX846926   84 RotterdamE1300327_MF140689   84 Nashville_9387_MG012449
85 SaitamaU25_AB039780   85 RotterdamP1D0_AB385626   85 Santa_Rosa_3693_MG012450
86 GII.P11
 (2)		 OH-QW170_AY823306   86 SN2000JA_AB190457   86 Santa_Rosa_3812_MG012448
87 Sw43_AB126320   87 Toronto_U02030   87 GII.6 Sakaeo15_AY646855
88 GII.P12
 (5)		 Asia_AB220921   88 GII.4
 (3)		 CHDC2094_FJ537135   88 GII.7 20072248_AB630067
89 Mc37_AY237415   89 CHDC5191_FJ537134   89 GII.8
 (2)		 Monterey_6283_MG012453
90 SaitamaT80_KJ196276   90 MI_2021-SP-0021_Caliciviridae   90 Monterey_6284_MG012452
91 SaitamaU1_AB039775   91 GII.4
Allegany
 (4)		 Allegany230_MT028542   91 GII.NA1 Siaya2345_MH922772
92 Sakai04179_AB220922   92 Botswana_1137_MW019958   92 GIV.1
 (30)		 Angelholm-SW278_DQ125333
93 GII.P13
 (2)		 Briancon870_EF529741   93 Frederick0013_PQ213438   93 Angelholm-SW314_DQ125334
94 PunePC25_EU921354   94 KLFNOV005_MW559992   94 Ehime1107_DQ058829
95 GII.P15
 (2)		 Beijing55161_GQ856474   95 GII.4 Asia
 (2)		 Asia_AB220921   95 Ehime1596_DQ366346
96 SapporoHK299_KJ196290   96 Sakai04179_AB220922   96 Leon_1751_MG012454
97 GII.P16
 (6)		 CS-E1_AY502009   97 GII.4
Den Haag
 (3)		 DenHaag_EF126965   97 Lima_1858_MG012420
98 Neustrelitz260_AY772730   98 Minerva_EU078417   98 Lima_1861_MG012429
99 OH16002_LC153121   99 Shimane2_AB541348   99 Lima_1862_MG012461
100 SaitamaT87_KJ196286   100 GII.4 Farmington Hills
 (2)		 FarmingtonHills_AY502023   100 Lima_1864_MG012462
101 SantaRosa1764_KY865306   101 Langen1061_AY485642   101 Lima_1865_MG012463
102 Tiffin_AY502010   102 GII.4 Hong Kong CUHK-NS-2200_MN400355   102 Lima_1869_MG012431
103 GII.P17
 (3)		 CA_OP689689   103 GII.4
Hunter
 (3)		 Chiba04-1008_AB220926   103 Lima_1871_MG012432
104 Kawasaki308_LC037415   104 Hunter504D04O_DQ078814   104 Nashville_9327_MG012430
105 Kawasaki323_AB983218   105 Hunter_AY883096   105 Nashville_9489_MG012421
106 GII.P18
 (2)		 OH-QW101_AY823304   106 GII.4
New Orleans
 (4)		 Hokkaido3_AB933767   106 Portland_3587_MG012425
107 OH-QW125_AY823305   107 NSW001P_GQ845367   107 Portland_3602_MG012428
108 GII.P20 Leverkusen267_EU424333   108 NewOrleans_2010-SP-0870_KX353972   108 Portland_3629_MG012424
109 GII.P21
 (7)		 109_MH218579   109 NewOrleans_GU445325   109 Portland_3631_MG012459
110 Herzberg385_AF539439   110 GII.4 Osaka
 (2)		 Osaka_AB434770   110 Portland_3632_MG012423
111 KawasakiYO284_KJ196284   111 PunePC51_EU921388   111 Portland_3633_MG012427
112 NSW730O_KT239614   112 GII.4 San Francisco
 (2)		 SanFrancisco_SA_OR262344   112 Portland_3636_MG012426
113 Picton_AY919139   113 SanFrancisco_USA_OR262322   113 Portland_3641_MG012457
114 PontdeRoide673_AY682549   114 GII.4
Sydney
 (18)		 B7265_MW521126   114 Portland_3643_MG012458
115 RotterdamE1300327_MF140689   115 Broward1056_2015_P31_MK762630   115 Portland_3644_MG012422
116 GII.P22 Yuri_AB083780   116 EauClaire0042_2018_P4_PQ207921   116 Portland_3649_MG012456
117 GII.P23
 (2)		 Loreto1847_KT290889   117 Franklin0027_2019_P16_PQ195892   117 Portland_3651_MG012455
118 Loreto6422_MG495080   118 Grant0015_2018_P16_MK752934   118 Quetzaltenago_3711_MG012460
119 GII.P24
 (2)		 EdenPrairie5457_MG495084   119 Huron0309_2020_P31_PQ195913   119 Sydney3_DQ104357
120 Loreto1972_KY225989   120 Lincoln0055_2023_P16_PQ209098   120 Yakumo8_AB455795
121 GII.P25 Dhaka1928_MG495083   121 LosAngeles0043_2021_P16_PQ218566   121 Hou7-1181_AF435814
122 GII.P26
 (2)		 Leipzig07788a_MF352142   122 Maricopa0179_2022_P16_PQ196561   122 GV.1
 (7)		 Arg39_AY289803
123 Leon4509_KU306738   123 Michigan0095_2023_P16_PQ208322   123 Ehime01-1669_AJ606699
124 GII.P27 Loreto0959_MG495077   124 Milwaukee0499_2023_P16_PQ207934   124 Ehime475_DQ366344
125 GII.P28 Yuzawa-Gira2HS_KJ196291   125 Minnesota0019_2019_P4_PQ214833   125 Ishikawa03-158_AJ786352
126 GII.P29
 (2)		 Arg320_AF190817   126 OH16002_LC153121   126 Nashville_9424_MG012433
127 SN2000JA_AB190457   127 SP-0251_121714_WI_KX354134   127 Nashville_9492_MG012434
128 GII.P30
 (2)		 KL109_JX846925   128 SanLuisObispo0063_2022_P16_PQ196529   128 NongKhai24_AY646856
129 SnowMountain_AY134748   129 Sydney2105Y1677_OL336352   129 GV.2
 (2)		 NagoyaNGY1_AB775659
130 GII.P31
 (7)		 CUHK-NS-2200_MN400355   130 Sydney_JX459908   130 Sollentuna_KY040366
131 CUHK-NS-682_KT589391   131 WoononaNSW3309_JX459907  
132 IPH2172-09VG4_JF697282   132 GII.4
US95-96
 (3)		 Saitama_AB112306  
133 Osaka_AB434770   133 US95-96_AF414424  
134 PunePC51_EU921388   134 US95-96_AJ004864  
135 Sydney_JX459908   135 GII.4 Wichita
 (2)		 RedWillow0059_PQ218943  
136 WoononaNSW3309_JX459907   136 Wichita0031_PQ207944  
137 GII.P32
 (2)		 HenrytonSP17_MF405169   137 GII.4 Yerseke
 (2)		 Isumi060936_AB294790  
138 S63_AY682550   138 Yerseke_EF126963  
139 GII.P33
 (2)		 Ascension208_JN797508   139 GII.5
 (4)		 Hillingdon_AJ277607  
140 StGeorge_GQ845370   140 S63_AY682550  
141 GII.P34
 (2)		 OC97007_AB089882   141 SaitamaT49_KJ196277  
142 SaitamaE24_KF730316   142 SaitamaT52_KJ196288  
143 GII.P35
 (2)		 B17_KC576911   143 GII.6
 (12)		 14-55_KX158281  
144 E3_AY682552   144 30443_KM198534  
145 GII.P36
 (2)		 OC96065_AF315813   145 Belgium-4_MN248516  
146 Tokyo_AB684664   146 GZ2010-L96Guangzhou_JX989075  
147 GII.P37
 (2)		 Amsterdam3_KJ194507   147 Miami292_AF414410  
148 PunePC24_EU921353   148 S9c_KC576910  
149 GII.P38 Beijing53931_GQ856469   149 SaitamaU16_AB039778  
150 GII.P39 CHDC5191_FJ537134   150 SaitamaU4_AB039777  
151 GII.P40
 (2)		 OsakaNI_DQ366347   151 Seacroft_AJ277620  
152 SaitamaT49_KJ196277   152 Shizuoka8913_HM633213  
153 GII.P41
 (2)		 GoulburnValleyG5175B_DQ379714   153 TCHE99-13646_GU930737  
154 HK71_JX846924   154 Tokyo_AB684664  
155 GII.PNA1 Loreto1257_MG495079   155 GII.7
 (5)		 236_MH218692  
156 GII.PNA2 PNV06929_MG706448   156 CHDC3936_JX846926  
157 GII.PNA3 CHDC2094_FJ537135   157 Gwynedd273_AF414409  
158 GII.PNA4 Sw918_AB074893   158 Leeds_AJ277608  
159 GII.PNA5 Dhaka1940_MG495082   159 TAKAsanKimchi_KJ196295  
160 GII.PNA6 Arg13099_KX061540   160 GII.8
 (2)		 Amsterdam9818_AF195848  
161 GII.PNA7 No35-Saitama-99-1_LC342059   161 SaitamaU25_AB039780  
162 GII.PNA8 Empangeni10403_KR904229   162 GII.9
 (2)		 GoulburnValleyG5175C_DQ379715  
163 GII.PNA9 Arg15813_MK733205   163 VA97207_AY038599  
164 GIV.P1
 (3)		 FortLauderdale_AF414426   164 GII.10
 (2)		 Erfurt546_AF427118  
165 LakeMacquarie_JQ613567   165 Mc37_AY237415  
166 SaintCloud_AF414427   166 GII.11
 (2)		 Sw43_AB126320  
167 GIV.PNA1 WI7002_KX907728   167 Sw918_AB074893  
168 GII.12
 (5)		 No35-Saitama-99-1_LC342059  
169 PunePC24_EU921353  
170 SaitamaU1_AB039775  
171 StGeorge_GQ845370  
172 Wortley_AJ277618  
173 GII.13
 (5)		 Empangeni10403_KR904229  
174 Fayetteville_AY113106  
175 GoulburnValleyG5175B_DQ379714  
176 PunePC25_EU921354  
177 SaitamaT80_KJ196276  
178 GII.14
 (6)		 Beijing55028_GQ856465  
179 M7_AY130761  
180 Maizuru8533_GU017903  
181 PV-Voelk0017_KM289171  
182 Saga8610_GU594162  
183 SendaiYG99_KJ196278  
184 GII.16
 (3)		 Hiram_AY502006  
185 Neustrelitz260_AY772730  
186 Tiffin_AY502010  
187 GII.17
 (8)		 Arg13099_KX061540  
188 Briancon870_EF529741  
189 CS-E1_AY502009  
190 CUHK-NS-682_KT589391  
191 Katrina-17_DQ438972  
192 Kawasaki308_LC037415  
193 Kawasaki323_AB983218  
194 SaitamaT87_KJ196286  
195 GII.18
 (2)		 OH-QW101_AY823304  
196 OH-QW125_AY823305  
197 GII.19 OH-QW170_AY823306  
198 GII.20
 (3)		 Leverkusen267_EU424333  
199 Luckewalde591_EU373815  
200 OC071182007_AB542917  
201 GII.21
 (2)		 IF1998_AY675554  
202 KawasakiYO284_KJ196284  
203 GII.22
 (2)		 Dhaka1940_MG495082  
204 Yuri_AB083780  
205 GII.23
 (2)		 Loreto1847_KT290889  
206 Loreto6422_MG495080  
207 GII.24
 (2)		 EdenPrairie5457_MG495084  
208 Loreto1972_KY225989  
209 GII.25
 (2)		 Beijing53931_GQ856469  
210 Dhaka1928_MG495083  
211 GII.26
 (2)		 Leipzig07788a_MF352142  
212 Leon4509_KU306738  
213 GII.27
 (2)		 Arg15813_MK733205  
214 Loreto0959_MG495077  
215 GII.ancestral Tokyo68-4_AB684728  
216 GII.NA1 Loreto1257_MG495079  
217 GII.NA2 PNV06929_MG706448  
218 GIV.1
 (10)		 Ahrenshoop246_JQ970479  
219 Alph23_DQ093067  
220 Alphatron_AF195847  
221 CCDCGR1113-59_KC894731  
222 Canet-en-Roussillon_KT030674  
223 FortLauderdale_AF414426  
224 Italy980_FM865412  
225 LakeMacquarie_JQ613567  
226 OC01017023_LC101824  
227 SaintCloud_AF414427  
228 GIV.NA1 WI7002_KX907728  
229 GVIII.1
 (3)		 Chiba-040502_AJ844470  
230 Tokyo2-18_AB985418  
231 Yuzawa-Gira2HS_KJ196291  
232 GIX.1
 (4)		 Beijing55161_GQ856474  
233 J23_AY130762  
234 Mex7076_AF542090  
235 SapporoHK299_KJ196290  

Last updated: October 16, 2024