Human calicivirus
Typing tool

Reference sequences

Norovirus (224) Sapovirus (130)
polymerase (RdRp) - 168 capsid (VP1) - 233 capsid (VP1)
1 GI.P1
 (4)		 Gothenburg_EU085529   1 GI.1
 (4)		 Gothenburg_EU085529   1 GI.1
 (19)		 Chanthaburi74_AY646854
2 Norwalk_M87661   2 Norwalk_M87661   2 Dresden_AY694184
3 SRSV-KY-8989J_L23828   3 SRSV-KY-8989J_L23828   3 Hunan_KX980412
4 V1622-06_AB447406   4 V1622-06_AB447406   4 Lima_1845_MG012398
5 GI.P2
 (2)		 Leuven_FJ515294   5 GI.2
 (3)		 Constellation59_AF435807   5 Lima_1863_MG012439
6 Southampton_L07418   6 Leuven_FJ515294   6 Lima_1870_MG012436
7 GI.P3
 (3)		 CHDC116_JX846929   7 Southampton_L07418   7 Manchester_X86560
8 ShimizuKK2866_KJ196292   8 GI.3
 (16)		 Akabane991130_EF547396   8 Mc114_AY237422
9 VA98115_AY038598   9 Beijing54108_GQ856470   9 N21_AY237423
10 GI.P4
 (4)		 Beijing55169_GQ856475   10 Beijing54114_GQ856471   10 Nashville_9427_MG012397
11 Chiba407_AB042808   11 Beijing54660_GQ856472   11 Nashville_9432_MG012437
12 Groningen_LN854563   12 Beijing55042_GQ856473   12 Nashville_9478_MG012438
13 Queensarmsleeds92_AJ313030   13 CHDC116_JX846929   13 Nashville_9491_MG012400
14 GI.P5
 (2)		 AppalachicolaBay318_AF414406   14 DesertShield395_U04469   14 Nashville_9691-1_MG012435
15 Siklos-HUN5407_KJ402295   15 Muenster702_KM289169   15 NongKhai50_AY646853
16 GI.P6
 (2)		 14-BC-1_KP027330   16 OS-32_LC122713   16 Portland_3639_MG012399
17 BS5(Hesse)_AF093797   17 Otofuke_AB187514   17 SapporoMT-2010_HM002617
18 GI.P7
 (3)		 AlbertaEI404_KU311161   18 Potsdam196_AF439267   18 SeoulROK62_KP298674
19 LillaEdetS5b_JN603251   19 ShimizuKK2866_KJ196292   19 Zhejiang1_KT327081
20 Providence_JN899243   20 Stavanger_AF145709   20 GI.2
 (7)		 BE-HPI01_JX993277
21 GI.P8
 (2)		 KolkataL8775_AB290150   21 V170707_AB447414   21 BR-DF01_AB614356
22 NagoyaKY531_KJ196298   22 VA98115_AY038598   22 Nashville_9411_MG012440
23 GI.P9
 (3)		 CAIQ12110628_KF586507   23 Vesoul576_EF529738   23 Oakland_3023_MG012442
24 LillaEdetS48_JN183159   24 GI.4
 (5)		 Beijing55169_GQ856475   24 Oakland_6371_MG012441
25 Vancouver730_HQ637267   25 Chiba407_AB042808   25 Parkville_U73124
26 GI.P10
 (2)		 Beijing55042_GQ856473   26 Groningen_LN854563   26 Potsdam_AF294739
27 DesertShield395_U04469   27 Koblenz433_AF394960   27 GI.3
 (4)		 Chiba010658_AJ606696
28 GI.P11
 (3)		 Beijing53997_GQ856463   28 Queensarmsleeds92_AJ313030   28 OB2015_1927_MG012401
29 Beijing55063_GQ856464   29 GI.5
 (6)		 AppalachicolaBay318_AF414406   29 OH08021_AB623037
30 Hiroshima48-938_AB354289   30 Musgrove_AJ277614   30 Stockholm318_AF194182
31 GI.P12
 (2)		 SzUG1_AB039774   31 OC020180_LC101825   31 GI.4 Chiba000496_AJ606693
32 Yiwu-CB1_MH443711   32 Siklos-HUN5407_KJ402295   32 GI.5
 (3)		 Ehime2K-814_AJ606698
33 GI.P13
 (4)		 Beijing54108_GQ856470   33 SzUG1_AB039774   33 Ehime643_DQ366345
34 Beijing54114_GQ856471   34 Yiwu-CB1_MH443711   34 Yokote1_AB253740
35 Beijing54660_GQ856472   35 GI.6
 (9)		 14-BC-1_KP027330   35 GI.6
 (4)		 Chiba000764_AJ606694
36 Vesoul576_EF529738   36 BS5(Hesse)_AF093797   36 Nashville_9367_MG012443
37 GI.P14
 (2)		 Muenster702_KM289169   37 Beijing53997_GQ856463   37 Nichinan_AB455803
38 Otofuke_AB187514   38 Beijing55063_GQ856464   38 Tokyo08-2439_AB622435
39 GI.PNA1 WUG1_AB081723   39 Hiroshima48-938_AB354289   39 GI.7
 (2)		 D1714_AB522390
40 GI.PNA2
 (2)		 Dhaka1882_MH130046   40 No20-Saitama-98-17_LC342057   40 Ehime041680_AB258428
41 NizhnyNovgorod_FJ383816   41 Sindlesham_AJ277615   41 GII.1
 (16)		 Bristol_AJ249939
42 GI.PNA3 V170707_AB447414   42 VA497_AF538678   42 Chiba020003_AJ606692
43 GI.PNA4 No20-Saitama-98-17_LC342057   43 WUG1_AB081723   43 Ehime2K-1948_AJ786351
44 GII.P1 Hawaii_U07611   44 GI.7
 (8)		 AlbertaEI404_KU311161   44 London29845_U95645
45 GII.P2
 (2)		 MK04_DQ456824   45 Chiba030100_AJ844469   45 Lyon598_AJ271056
46 Melksham_X81879   46 Dhaka1882_MH130046   46 Mc2_AY237419
47 GII.P3
 (3)		 Amsterdam1_KJ194500   47 IF2036_AY675555   47 Nashville_9343_MG012444
48 MX_U22498   48 LillaEdetS5b_JN603251   48 Nashville_9346_MG012445
49 Toronto_U02030   49 NizhnyNovgorod_FJ383816   49 Nashville_9353_MG012404
50 GII.P4 Den Haag
 (2)		 DenHaag_EF126965   50 Providence_JN899243   50 Nashville_9360_MG012402
51 Shimane2_AB541348   51 Winchester_AJ277609   51 Nashville_9385_MG012409
52 GII.P4 Farmington Hills
 (2)		 FarmingtonHills_AY502023   52 GI.8
 (2)		 Boxer_AF538679   52 Nashville_9422_MG012403
53 Langen1061_AY485642   53 NagoyaKY531_KJ196298   53 Nashville_9510_MG012406
54 GII.P4 Hunter
 (2)		 Chiba04-1008_AB220926   54 GI.9
 (3)		 CAIQ12110628_KF586507   54 Nashville_9511_MG012405
55 Hunter504D04O_DQ078814   55 LillaEdetS48_JN183159   55 Nashville_9525_MG012407
56 GII.P4
New Orleans
 (4)		 Hokkaido3_AB933767   56 Vancouver730_HQ637267   56 Nashville_9691-2_MG012408
57 NSW001P_GQ845367   57 GI.ancestral Tokyo45-5_AB684696   57 GII.2
 (8)		 Chiba990727_AJ606689
58 NewOrleans_GU445325   58 GII.1
 (5)		 Amsterdam3_KJ194507   58 Mc10_AY237420
59 WI-467121_KX354134   59 Ascension208_JN797508   59 Mex340_AF435812
60 GII.P4 US95-96
 (2)		 Saitama_AB112306   60 Dillingen391_AF425767   60 Nashville_9331_MG012411
61 US95-96_AF414424   61 Hawaii_U07611   61 Nashville_9393_MG012412
62 GII.P4 Yerseke
 (2)		 Isumi060936_AB294790   62 Picton_AY919139   62 Nashville_9521_MG012410
63 Yerseke_EF126963   63 GII.2
 (12)		 E3_AY682552   63 Nashville_9795_MG012413
64 GII.P5 SaitamaT52_KJ196288   64 HenrytonSP17_MF405169   64 Siaya2158_MH922774
65 GII.P6
 (2)		 GZ2010-L96Guangzhou_JX989075   65 KL109_JX846925   65 GII.3
 (13)		 13-3-2_KM092509
66 SaitamaU16_AB039778   66 MK04_DQ456824   66 20082029_AB630068
67 GII.P7
 (18)		 14-55_KX158281   67 Melksham_X81879   67 C12_AY603425
68 236_MH218692   68 OC97007_AB089882   68 Chiba040507_AJ786350
69 30443_KM198534   69 OsakaNI_DQ366347   69 Kushiro5_AB455793
70 Beijing55028_GQ856465   70 PontdeRoide673_AY682549   70 Leon_6701_MG012414
71 Belgium-4_MN248516   71 SaitamaE24_KF730316   71 Leon_6708_MG012416
72 GoulburnValleyG5175C_DQ379715   72 SantaRosa1764_KY865306   72 Lima_1856_MG012417
73 Gwynedd273_AF414409   73 SnowMountain_AY134748   73 Nashville_9354_MG012419
74 Maizuru8533_GU017903   74 Vaals_AB281090   74 Nashville_9513_MG012418
75 Miami292_AF414410   75 GII.3
 (13)		 109_MH218579   75 Nashville_9517_MG012415
76 OC071182007_AB542917   76 Amsterdam1_KJ194500   76 Nayoro4_AB455794
77 PV-Voelk0017_KM289171   77 Arg320_AF190817   77 Sydney53_DQ104360
78 S9c_KC576910   78 HK71_JX846924   78 GII.4
 (3)		 Kumamoto6_AB429084
79 Saga8610_GU594162   79 Herzberg385_AF539439   79 Lima_1873_MG012446
80 SaitamaU4_AB039777   80 IPH2172-09VG4_JF697282   80 PHL-TGO12-028_KP067444
81 SendaiYG99_KJ196278   81 MX_U22498   81 GII.5
 (6)		 Cruiseship_AY289804
82 TAKAsanKimchi_KJ196295   82 Milwaukee009_JN565063   82 Lima_1868_MG012451
83 TCHE99-13646_GU930737   83 NSW730O_KT239614   83 Nashville_9349_MG012447
84 VA97207_AY038599   84 RotterdamE1300327_MF140689   84 Nashville_9387_MG012449
85 GII.P8
 (2)		 CHDC3936_JX846926   85 RotterdamP1D0_AB385626   85 Santa_Rosa_3693_MG012450
86 SaitamaU25_AB039780   86 SN2000JA_AB190457   86 Santa_Rosa_3812_MG012448
87 GII.P11
 (2)		 OH-QW170_AY823306   87 Toronto_U02030   87 GII.6 Sakaeo15_AY646855
88 Sw43_AB126320   88 GII.4
 (7)		 Allegany0230_MT028542   88 GII.7 20072248_AB630067
89 GII.P12
 (5)		 Asia_AB220921   89 Botswana1026_MW019618   89 GII.8
 (2)		 Monterey_6283_MG012453
90 Mc37_AY237415   90 CA-RGDS-11182_OR700741   90 Monterey_6284_MG012452
91 SaitamaT80_KJ196276   91 CHDC2094_FJ537135   91 GII.NA1 Siaya2345_MH922772
92 SaitamaU1_AB039775   92 CHDC5191_FJ537134   92 GIV.1
 (30)		 Angelholm-SW278_DQ125333
93 Sakai04179_AB220922   93 MI_2021-SP-0021_Caliciviridae   93 Angelholm-SW314_DQ125334
94 GII.P13
 (2)		 Briancon870_EF529741   94 WI_2021-SP-0187_Caliciviridae   94 Ehime1107_DQ058829
95 PunePC25_EU921354   95 GII.4 Asia
 (2)		 Asia_AB220921   95 Ehime1596_DQ366346
96 GII.P15
 (2)		 Beijing55161_GQ856474   96 Sakai04179_AB220922   96 Leon_1751_MG012454
97 SapporoHK299_KJ196290   97 GII.4
Den Haag
 (3)		 DenHaag_EF126965   97 Lima_1858_MG012420
98 GII.P16
 (6)		 CS-E1_AY502009   98 Minerva_EU078417   98 Lima_1861_MG012429
99 Neustrelitz260_AY772730   99 Shimane2_AB541348   99 Lima_1862_MG012461
100 OH16002_LC153121   100 GII.4 Farmington Hills
 (2)		 FarmingtonHills_AY502023   100 Lima_1864_MG012462
101 SaitamaT87_KJ196286   101 Langen1061_AY485642   101 Lima_1865_MG012463
102 SantaRosa1764_KY865306   102 GII.4 Hong Kong CUHK-NS-2200_MN400355   102 Lima_1869_MG012431
103 Tiffin_AY502010   103 GII.4
Hunter
 (3)		 Chiba04-1008_AB220926   103 Lima_1871_MG012432
104 GII.P17
 (3)		 CA_OP689689   104 Hunter504D04O_DQ078814   104 Nashville_9327_MG012430
105 Kawasaki308_LC037415   105 Hunter_AY883096   105 Nashville_9489_MG012421
106 Kawasaki323_AB983218   106 GII.4
New Orleans
 (4)		 Hokkaido3_AB933767   106 Portland_3587_MG012425
107 GII.P18
 (2)		 OH-QW101_AY823304   107 NSW001P_GQ845367   107 Portland_3602_MG012428
108 OH-QW125_AY823305   108 NewOrleans_2010-SP-0870_KX353972   108 Portland_3629_MG012424
109 GII.P20 Leverkusen267_EU424333   109 NewOrleans_GU445325   109 Portland_3631_MG012459
110 GII.P21
 (7)		 109_MH218579   110 GII.4 Osaka
 (2)		 Osaka_AB434770   110 Portland_3632_MG012423
111 Herzberg385_AF539439   111 PunePC51_EU921388   111 Portland_3633_MG012427
112 KawasakiYO284_KJ196284   112 GII.4 San Francisco
 (2)		 SanFrancisco_SA_OR262344   112 Portland_3636_MG012426
113 NSW730O_KT239614   113 SanFrancisco_USA_OR262322   113 Portland_3641_MG012457
114 Picton_AY919139   114 GII.4
Sydney
 (18)		 B7265_MW521126   114 Portland_3643_MG012458
115 PontdeRoide673_AY682549   115 CA_2022-SP-0063_Caliciviridae   115 Portland_3644_MG012422
116 RotterdamE1300327_MF140689   116 CA_2022-SP-0083_Caliciviridae   116 Portland_3649_MG012456
117 GII.P22 Yuri_AB083780   117 CA_2022-SP-0179_Caliciviridae   117 Portland_3651_MG012455
118 GII.P23
 (2)		 Loreto1847_KT290889   118 FL_2016-SP-0021_Caliciviridae   118 Quetzaltenago_3711_MG012460
119 Loreto6422_MG495080   119 LAC_2021-SP-0014_Caliciviridae   119 Sydney3_DQ104357
120 GII.P24
 (2)		 EdenPrairie5457_MG495084   120 MI_2023-SP-0095_Caliciviridae   120 Yakumo8_AB455795
121 Loreto1972_KY225989   121 MN_2019-SP-0118_Caliciviridae   121 Hou7-1181_AF435814
122 GII.P25 Dhaka1928_MG495083   122 OH16002_LC153121   122 GV.1
 (7)		 Arg39_AY289803
123 GII.P26
 (2)		 Leipzig07788a_MF352142   123 OH_2019-SP-0181_Caliciviridae   123 Ehime01-1669_AJ606699
124 Leon4509_KU306738   124 OH_2020-SP-0059_Caliciviridae   124 Ehime475_DQ366344
125 GII.P27 Loreto0959_MG495077   125 OR_2023-SP-0055_Caliciviridae   125 Ishikawa03-158_AJ786352
126 GII.P28 Yuzawa-Gira2HS_KJ196291   126 Sydney2105Y1677_OL336352   126 Nashville_9424_MG012433
127 GII.P29
 (2)		 Arg320_AF190817   127 Sydney_JX459908   127 Nashville_9492_MG012434
128 SN2000JA_AB190457   128 WI-467121_KX354134   128 NongKhai24_AY646856
129 GII.P30
 (2)		 KL109_JX846925   129 WI_2017-SP-0298_Caliciviridae   129 GV.2
 (2)		 NagoyaNGY1_AB775659
130 SnowMountain_AY134748   130 WI_2018-SP-0212_Caliciviridae   130 Sollentuna_KY040366
131 GII.P31
 (7)		 CUHK-NS-2200_MN400355   131 WoononaNSW3309_JX459907  
132 CUHK-NS-682_KT589391   132 GII.4
US95-96
 (3)		 Saitama_AB112306  
133 IPH2172-09VG4_JF697282   133 US95-96_AF414424  
134 Osaka_AB434770   134 US95-96_AJ004864  
135 PunePC51_EU921388   135 GII.4 Yerseke
 (2)		 Isumi060936_AB294790  
136 Sydney_JX459908   136 Yerseke_EF126963  
137 WoononaNSW3309_JX459907   137 GII.5
 (4)		 Hillingdon_AJ277607  
138 GII.P32
 (2)		 HenrytonSP17_MF405169   138 S63_AY682550  
139 S63_AY682550   139 SaitamaT49_KJ196277  
140 GII.P33
 (2)		 Ascension208_JN797508   140 SaitamaT52_KJ196288  
141 StGeorge_GQ845370   141 GII.6
 (12)		 14-55_KX158281  
142 GII.P34
 (2)		 OC97007_AB089882   142 30443_KM198534  
143 SaitamaE24_KF730316   143 Belgium-4_MN248516  
144 GII.P35
 (2)		 B17_KC576911   144 GZ2010-L96Guangzhou_JX989075  
145 E3_AY682552   145 Miami292_AF414410  
146 GII.P36
 (2)		 OC96065_AF315813   146 S9c_KC576910  
147 Tokyo_AB684664   147 SaitamaU16_AB039778  
148 GII.P37
 (2)		 Amsterdam3_KJ194507   148 SaitamaU4_AB039777  
149 PunePC24_EU921353   149 Seacroft_AJ277620  
150 GII.P38 Beijing53931_GQ856469   150 Shizuoka8913_HM633213  
151 GII.P39 CHDC5191_FJ537134   151 TCHE99-13646_GU930737  
152 GII.P40
 (2)		 OsakaNI_DQ366347   152 Tokyo_AB684664  
153 SaitamaT49_KJ196277   153 GII.7
 (5)		 236_MH218692  
154 GII.P41
 (2)		 GoulburnValleyG5175B_DQ379714   154 CHDC3936_JX846926  
155 HK71_JX846924   155 Gwynedd273_AF414409  
156 GII.PNA1 Loreto1257_MG495079   156 Leeds_AJ277608  
157 GII.PNA2 PNV06929_MG706448   157 TAKAsanKimchi_KJ196295  
158 GII.PNA3 CHDC2094_FJ537135   158 GII.8
 (2)		 Amsterdam9818_AF195848  
159 GII.PNA4 Sw918_AB074893   159 SaitamaU25_AB039780  
160 GII.PNA5 Dhaka1940_MG495082   160 GII.9
 (2)		 GoulburnValleyG5175C_DQ379715  
161 GII.PNA6 Arg13099_KX061540   161 VA97207_AY038599  
162 GII.PNA7 No35-Saitama-99-1_LC342059   162 GII.10
 (2)		 Erfurt546_AF427118  
163 GII.PNA8 Empangeni10403_KR904229   163 Mc37_AY237415  
164 GII.PNA9 Arg15813_MK733205   164 GII.11
 (2)		 Sw43_AB126320  
165 GIV.P1
 (3)		 FortLauderdale_AF414426   165 Sw918_AB074893  
166 LakeMacquarie_JQ613567   166 GII.12
 (5)		 No35-Saitama-99-1_LC342059  
167 SaintCloud_AF414427   167 PunePC24_EU921353  
168 GIV.PNA1 WI7002_KX907728   168 SaitamaU1_AB039775  
169 StGeorge_GQ845370  
170 Wortley_AJ277618  
171 GII.13
 (5)		 Empangeni10403_KR904229  
172 Fayetteville_AY113106  
173 GoulburnValleyG5175B_DQ379714  
174 PunePC25_EU921354  
175 SaitamaT80_KJ196276  
176 GII.14
 (6)		 Beijing55028_GQ856465  
177 M7_AY130761  
178 Maizuru8533_GU017903  
179 PV-Voelk0017_KM289171  
180 Saga8610_GU594162  
181 SendaiYG99_KJ196278  
182 GII.16
 (3)		 Hiram_AY502006  
183 Neustrelitz260_AY772730  
184 Tiffin_AY502010  
185 GII.17
 (8)		 Arg13099_KX061540  
186 Briancon870_EF529741  
187 CS-E1_AY502009  
188 CUHK-NS-682_KT589391  
189 Katrina-17_DQ438972  
190 Kawasaki308_LC037415  
191 Kawasaki323_AB983218  
192 SaitamaT87_KJ196286  
193 GII.18
 (2)		 OH-QW101_AY823304  
194 OH-QW125_AY823305  
195 GII.19 OH-QW170_AY823306  
196 GII.20
 (3)		 Leverkusen267_EU424333  
197 Luckewalde591_EU373815  
198 OC071182007_AB542917  
199 GII.21
 (2)		 IF1998_AY675554  
200 KawasakiYO284_KJ196284  
201 GII.22
 (2)		 Dhaka1940_MG495082  
202 Yuri_AB083780  
203 GII.23
 (2)		 Loreto1847_KT290889  
204 Loreto6422_MG495080  
205 GII.24
 (2)		 EdenPrairie5457_MG495084  
206 Loreto1972_KY225989  
207 GII.25
 (2)		 Beijing53931_GQ856469  
208 Dhaka1928_MG495083  
209 GII.26
 (2)		 Leipzig07788a_MF352142  
210 Leon4509_KU306738  
211 GII.27
 (2)		 Arg15813_MK733205  
212 Loreto0959_MG495077  
213 GII.ancestral Tokyo68-4_AB684728  
214 GII.NA1 Loreto1257_MG495079  
215 GII.NA2 PNV06929_MG706448  
216 GIV.1
 (10)		 Ahrenshoop246_JQ970479  
217 Alph23_DQ093067  
218 Alphatron_AF195847  
219 CCDCGR1113-59_KC894731  
220 Canet-en-Roussillon_KT030674  
221 FortLauderdale_AF414426  
222 Italy980_FM865412  
223 LakeMacquarie_JQ613567  
224 OC01017023_LC101824  
225 SaintCloud_AF414427  
226 GIV.NA1 WI7002_KX907728  
227 GVIII.1
 (3)		 Chiba-040502_AJ844470  
228 Tokyo2-18_AB985418  
229 Yuzawa-Gira2HS_KJ196291  
230 GIX.1
 (4)		 Beijing55161_GQ856474  
231 J23_AY130762  
232 Mex7076_AF542090  
233 SapporoHK299_KJ196290  

Last updated: March 26, 2024