Typing tool

Reference sequences

Norovirus (261) Sapovirus (130)
polymerase (RdRp) - 187 capsid (VP1) - 258 capsid (VP1)
1 GI.P1
 (4)
Gothenburg_EU085529   1 GI.1
 (4)
Gothenburg_EU085529   1 GI.1
 (19)
Chanthaburi74_AY646854
2 Norwalk_M87661   2 Norwalk_M87661   2 Dresden_AY694184
3 SRSV-KY-8989J_L23828   3 SRSV-KY-8989J_L23828   3 Hunan_KX980412
4 V1622-06_AB447406   4 V1622-06_AB447406   4 Lima_1845_MG012398
5 GI.P2
 (2)
Leuven_FJ515294   5 GI.2
 (3)
Constellation59_AF435807   5 Lima_1863_MG012439
6 Southampton_L07418   6 Leuven_FJ515294   6 Lima_1870_MG012436
7 GI.P3
 (3)
CHDC116_JX846929   7 Southampton_L07418   7 Manchester_X86560
8 ShimizuKK2866_KJ196292   8 GI.3
 (16)
Akabane991130_EF547396   8 Mc114_AY237422
9 VA98115_AY038598   9 Beijing54108_GQ856470   9 N21_AY237423
10 GI.P4
 (4)
Beijing55169_GQ856475   10 Beijing54114_GQ856471   10 Nashville_9427_MG012397
11 Chiba407_AB042808   11 Beijing54660_GQ856472   11 Nashville_9432_MG012437
12 Groningen_LN854563   12 Beijing55042_GQ856473   12 Nashville_9478_MG012438
13 Queensarmsleeds92_AJ313030   13 CHDC116_JX846929   13 Nashville_9491_MG012400
14 GI.P5
 (2)
AppalachicolaBay318_AF414406   14 DesertShield395_U04469   14 Nashville_9691-1_MG012435
15 Siklos-HUN5407_KJ402295   15 Muenster702_KM289169   15 NongKhai50_AY646853
16 GI.P6
 (2)
14-BC-1_KP027330   16 OS-32_LC122713   16 Portland_3639_MG012399
17 BS5_Hesse_AF093797   17 Otofuke_AB187514   17 SapporoMT-2010_HM002617
18 GI.P7
 (3)
AlbertaEI404_KU311161   18 Potsdam196_AF439267   18 SeoulROK62_KP298674
19 LillaEdetS5b_JN603251   19 ShimizuKK2866_KJ196292   19 Zhejiang1_KT327081
20 Providence_JN899243   20 Stavanger_AF145709   20 GI.2
 (7)
BE-HPI01_JX993277
21 GI.P8
 (3)
890321_GU299761   21 V170707_AB447414   21 BR-DF01_AB614356
22 KolkataL8775_AB290150   22 VA98115_AY038598   22 Nashville_9411_MG012440
23 NagoyaKY531_KJ196298   23 Vesoul576_EF529738   23 Oakland_3023_MG012442
24 GI.P9
 (3)
CAIQ12110628_KF586507   24 GI.4
 (5)
Beijing55169_GQ856475   24 Oakland_6371_MG012441
25 LillaEdetS48_JN183159   25 Chiba407_AB042808   25 Parkville_U73124
26 Vancouver730_HQ637267   26 Groningen_LN854563   26 Potsdam_AF294739
27 GI.P10
 (2)
Beijing55042_GQ856473   27 Koblenz433_AF394960   27 GI.3
 (4)
Chiba010658_AJ606696
28 DesertShield395_U04469   28 Queensarmsleeds92_AJ313030   28 OB2015_1927_MG012401
29 GI.P11
 (3)
Beijing53997_GQ856463   29 GI.5
 (6)
AppalachicolaBay318_AF414406   29 OH08021_AB623037
30 Beijing55063_GQ856464   30 Musgrove_AJ277614   30 Stockholm318_AF194182
31 Hiroshima48-938_AB354289   31 OC020180_LC101825   31 GI.4 Chiba000496_AJ606693
32 GI.P12
 (2)
SzUG1_AB039774   32 Siklos-HUN5407_KJ402295   32 GI.5
 (3)
Ehime2K-814_AJ606698
33 Yiwu-CB1_MH443711   33 SzUG1_AB039774   33 Ehime643_DQ366345
34 GI.P13
 (4)
Beijing54108_GQ856470   34 Yiwu-CB1_MH443711   34 Yokote1_AB253740
35 Beijing54114_GQ856471   35 GI.6
 (9)
14-BC-1_KP027330   35 GI.6
 (4)
Chiba000764_AJ606694
36 Beijing54660_GQ856472   36 BS5_Hesse_AF093797   36 Nashville_9367_MG012443
37 Vesoul576_EF529738   37 Beijing53997_GQ856463   37 Nichinan_AB455803
38 GI.P14
 (2)
Muenster702_KM289169   38 Beijing55063_GQ856464   38 Tokyo08-2439_AB622435
39 Otofuke_AB187514   39 Hiroshima48-938_AB354289   39 GI.7
 (2)
D1714_AB522390
40 GI.PNA1 WUG1_AB081723   40 No20-Saitama-98-17_LC342057   40 Ehime041680_AB258428
41 GI.PNA2
 (2)
Dhaka1882_MH130046   41 Sindlesham_AJ277615   41 GII.1
 (16)
Bristol_AJ249939
42 NizhnyNovgorod_FJ383816   42 VA497_AF538678   42 Chiba020003_AJ606692
43 GI.PNA3 V170707_AB447414   43 WUG1_AB081723   43 Ehime2K-1948_AJ786351
44 GI.PNA4 No20-Saitama-98-17_LC342057   44 GI.7
 (8)
AlbertaEI404_KU311161   44 London29845_U95645
45 GII.P1 Hawaii_U07611   45 Chiba030100_AJ844469   45 Lyon598_AJ271056
46 GII.P2
 (2)
MK04_DQ456824   46 Dhaka1882_MH130046   46 Mc2_AY237419
47 Melksham_X81879   47 IF2036_AY675555   47 Nashville_9343_MG012444
48 GII.P3
 (3)
Amsterdam1_KJ194500   48 LillaEdetS5b_JN603251   48 Nashville_9346_MG012445
49 MX_U22498   49 NizhnyNovgorod_FJ383816   49 Nashville_9353_MG012404
50 Toronto_U02030   50 Providence_JN899243   50 Nashville_9360_MG012402
51 GII.P4 Apeldoorn TurramurraNSW892U_HM748973   51 Winchester_AJ277609   51 Nashville_9385_MG012409
52 GII.P4 Bristol Bristol_X76716   52 GI.8
 (3)
890321_GU299761   52 Nashville_9422_MG012403
53 GII.P4 Den Haag
 (2)
DenHaag_EF126965   53 Boxer_AF538679   53 Nashville_9510_MG012406
54 Shimane2_AB541348   54 NagoyaKY531_KJ196298   54 Nashville_9511_MG012405
55 GII.P4 Farmington Hills
 (2)
FarmingtonHills_AY502023   55 GI.9
 (3)
CAIQ12110628_KF586507   55 Nashville_9525_MG012407
56 Langen1061_AY485642   56 LillaEdetS48_JN183159   56 Nashville_9691-2_MG012408
57 GII.P4 Hunter
 (2)
Chiba04-1008_AB220926   57 Vancouver730_HQ637267   57 GII.2
 (8)
Chiba990727_AJ606689
58 Hunter504D04O_DQ078814   58 GI.ancestral Tokyo45-5_AB684696   58 Mc10_AY237420
59 GII.P4
New Orleans
 (3)
Hokkaido3_AB933767   59 GII.1
 (5)
Amsterdam3_KJ194507   59 Mex340_AF435812
60 NSW001P_GQ845367   60 Ascension208_JN797508   60 Nashville_9331_MG012411
61 NewOrleans_GU445325   61 Dillingen391_AF425767   61 Nashville_9393_MG012412
62 GII.P4 US95-96
 (2)
Saitama_AB112306   62 Hawaii_U07611   62 Nashville_9521_MG012410
63 US95-96_AF414424   63 Picton_AY919139   63 Nashville_9795_MG012413
64 GII.P4 Yerseke
 (2)
Isumi060936_AB294790   64 GII.2
 (12)
E3_AY682552   64 Siaya2158_MH922774
65 Yerseke_EF126963   65 HenrytonSP17_MF405169   65 GII.3
 (13)
13-3-2_KM092509
66 GII.P5
 (2)
MOH_AF397156   66 KL109_JX846925   66 20082029_AB630068
67 SaitamaT52_KJ196288   67 MK04_DQ456824   67 C12_AY603425
68 GII.P6
 (2)
GZ2010-L96Guangzhou_JX989075   68 Melksham_X81879   68 Chiba040507_AJ786350
69 SaitamaU16_AB039778   69 OC97007_AB089882   69 Kushiro5_AB455793
70 GII.P7
 (21)
14-55_KX158281   70 OsakaNI_DQ366347   70 Leon_6701_MG012414
71 236_MH218692   71 PontdeRoide673_AY682549   71 Leon_6708_MG012416
72 30443_KM198534   72 SaitamaE24_KF730316   72 Lima_1856_MG012417
73 Beijing55028_GQ856465   73 SantaRosa1764_KY865306   73 Nashville_9354_MG012419
74 Belgium-4_MN248516   74 SnowMountain_AY134748   74 Nashville_9513_MG012418
75 GoulburnValleyG5175C_DQ379715   75 Vaals_AB281090   75 Nashville_9517_MG012415
76 Gwynedd273_AF414409   76 GII.3
 (13)
109_MH218579   76 Nayoro4_AB455794
77 Mahoning0050_PV174245   77 Amsterdam1_KJ194500   77 Sydney53_DQ104360
78 Maizuru8533_GU017903   78 Arg320_AF190817   78 GII.4
 (3)
Kumamoto6_AB429084
79 Miami292_AF414410   79 HK71_JX846924   79 Lima_1873_MG012446
80 NewYork0007_PV174244   80 Herzberg385_AF539439   80 PHL-TGO12-028_KP067444
81 OC071182007_AB542917   81 IPH2172-09VG4_JF697282   81 GII.5
 (6)
Cruiseship_AY289804
82 OsakaF140_AB258331   82 MX_U22498   82 Lima_1868_MG012451
83 PV-Voelk0017_KM289171   83 Milwaukee009_JN565063   83 Nashville_9349_MG012447
84 S9c_KC576910   84 NSW730O_KT239614   84 Nashville_9387_MG012449
85 Saga8610_GU594162   85 RotterdamE1300327_MF140689   85 Santa_Rosa_3693_MG012450
86 SaitamaU4_AB039777   86 RotterdamP1D0_AB385626   86 Santa_Rosa_3812_MG012448
87 SendaiYG99_KJ196278   87 SN2000JA_AB190457   87 GII.6 Sakaeo15_AY646855
88 TAKAsanKimchi_KJ196295   88 Toronto_U02030   88 GII.7 20072248_AB630067
89 TCHE99-13646_GU930737   89 GII.4
 (2)
CHDC2094_FJ537135   89 GII.8
 (2)
Monterey_6283_MG012453
90 VA97207_AY038599   90 CHDC5191_FJ537134   90 Monterey_6284_MG012452
91 GII.P8
 (2)
CHDC3936_JX846926   91 GII.4
Allegany
 (4)
Allegany230_MT028542   91 GII.NA1 Siaya2345_MH922772
92 SaitamaU25_AB039780   92 Botswana_1137_MW019958   92 GIV.1
 (30)
Angelholm-SW278_DQ125333
93 GII.P11
 (2)
OH-QW170_AY823306   93 Frederick0013_PQ213438   93 Angelholm-SW314_DQ125334
94 Sw43_AB126320   94 KLFNOV005_MW559992   94 Ehime1107_DQ058829
95 GII.P12
 (6)
Asia_AB220921   95 GII.4 Apeldoorn
 (2)
Apeldoorn317_AB445395   95 Ehime1596_DQ366346
96 Mc37_AY237415   96 TurramurraNSW892U_HM748973   96 Leon_1751_MG012454
97 SaitamaT80_KJ196276   97 GII.4 Asia
 (2)
Asia_AB220921   97 Lima_1858_MG012420
98 SaitamaU1_AB039775   98 Sakai04179_AB220922   98 Lima_1861_MG012429
99 Sakai04179_AB220922   99 GII.4 Bristol Bristol_X76716   99 Lima_1862_MG012461
100 Vietnam026_AF504671   100 GII.4
Den Haag
 (3)
DenHaag_EF126965   100 Lima_1864_MG012462
101 GII.P13
 (2)
Briancon870_EF529741   101 Minerva_EU078417   101 Lima_1865_MG012463
102 PunePC25_EU921354   102 Shimane2_AB541348   102 Lima_1869_MG012431
103 GII.P15
 (3)
Beijing55161_GQ856474   103 GII.4 Farmington Hills
 (2)
FarmingtonHills_AY502023   103 Lima_1871_MG012432
104 Hiroshima66_AB360387   104 Langen1061_AY485642   104 Nashville_9327_MG012430
105 SapporoHK299_KJ196290   105 GII.4 Henry Henry_FJ411170   105 Nashville_9489_MG012421
106 GII.P16
 (6)
CS-E1_AY502009   106 GII.4 Hong Kong CUHK-NS-2200_MN400355   106 Portland_3587_MG012425
107 Neustrelitz260_AY772730   107 GII.4
Hunter
 (3)
Chiba04-1008_AB220926   107 Portland_3602_MG012428
108 OH16002_LC153121   108 Hunter504D04O_DQ078814   108 Portland_3629_MG012424
109 SaitamaT87_KJ196286   109 Hunter_AY883096   109 Portland_3631_MG012459
110 SantaRosa1764_KY865306   110 GII.4
New Orleans
 (4)
Hokkaido3_AB933767   110 Portland_3632_MG012423
111 Tiffin_AY502010   111 NSW001P_GQ845367   111 Portland_3633_MG012427
112 GII.P17
 (7)
13BH1_KJ156329   112 NewOrleans_2010-SP-0870_KX353972   112 Portland_3636_MG012426
113 3351_MK789431   113 NewOrleans_GU445325   113 Portland_3641_MG012457
114 446222_OP805362   114 GII.4 Osaka
 (2)
Osaka_AB434770   114 Portland_3643_MG012458
115 CA-RGDS-1180_OR685283   115 PunePC51_EU921388   115 Portland_3644_MG012422
116 CA_OP689689   116 GII.4 Richmond Richmond_EU078406   116 Portland_3649_MG012456
117 Kawasaki308_LC037415   117 GII.4 San Francisco
 (2)
SanFrancisco_SA_OR262344   117 Portland_3651_MG012455
118 Kawasaki323_AB983218   118 SanFrancisco_USA_OR262322   118 Quetzaltenago_3711_MG012460
119 GII.P18
 (2)
OH-QW101_AY823304   119 GII.4
Sydney
 (18)
B7265_MW521126   119 Sydney3_DQ104357
120 OH-QW125_AY823305   120 Broward1056_2015_P31_MK762630   120 Yakumo8_AB455795
121 GII.P20
 (2)
Gothenburg_EU275779   121 EauClaire0042_2018_P4_PQ207921   121 Hou7-1181_AF435814
122 Leverkusen267_EU424333   122 Franklin0027_2019_P16_PQ195892   122 GV.1
 (7)
Arg39_AY289803
123 GII.P21
 (8)
109_MH218579   123 Grant0015_2018_P16_MK752934   123 Ehime01-1669_AJ606699
124 Herzberg385_AF539439   124 Huron0309_2020_P31_PQ195913   124 Ehime475_DQ366344
125 KawasakiYO284_KJ196284   125 Lincoln0055_2023_P16_PQ209098   125 Ishikawa03-158_AJ786352
126 NSW730O_KT239614   126 LosAngeles0043_2021_P16_PQ218566   126 Nashville_9424_MG012433
127 Picton_AY919139   127 Maricopa0179_2022_P16_PQ196561   127 Nashville_9492_MG012434
128 PontdeRoide673_AY682549   128 Michigan0095_2023_P16_PQ208322   128 NongKhai24_AY646856
129 RotterdamE1300327_MF140689   129 Milwaukee0499_2023_P16_PQ207934   129 GV.2
 (2)
NagoyaNGY1_AB775659
130 Salisbury150_JN899245   130 Minnesota0019_2019_P4_PQ214833   130 Sollentuna_KY040366
131 GII.P22
 (2)
MinatoN16_AB233471   131 OH16002_LC153121  
132 Yuri_AB083780   132 SP-0251_121714_WI_KX354134  
133 GII.P23
 (3)
Loreto1847_KT290889   133 SanLuisObispo0063_2022_P16_PQ196529  
134 Loreto6422_MG495080   134 Sydney2105Y1677_OL336352  
135 Quininde1906_KR232647   135 Sydney_JX459908  
136 GII.P24
 (2)
EdenPrairie5457_MG495084   136 WoononaNSW3309_JX459907  
137 Loreto1972_KY225989   137 GII.4
US95-96
 (3)
Saitama_AB112306  
138 GII.P25 Dhaka1928_MG495083   138 US95-96_AF414424  
139 GII.P26
 (2)
Leipzig07788a_MF352142   139 US95-96_AJ004864  
140 Leon4509_KU306738   140 GII.4 Wichita
 (2)
RedWillow0059_PQ218943  
141 GII.P27
 (2)
Loreto0959_MG495077   141 Wichita0031_PQ207944  
142 Loreto1041_MG495078   142 GII.4 Yerseke
 (2)
Isumi060936_AB294790  
143 GII.P28 Yuzawa-Gira2HS_KJ196291   143 Yerseke_EF126963  
144 GII.P29
 (2)
Arg320_AF190817   144 GII.5
 (6)
Hillingdon_AJ277607  
145 SN2000JA_AB190457   145 Hokkaido133_AB212306  
146 GII.P30
 (2)
KL109_JX846925   146 MOH_AF397156  
147 SnowMountain_AY134748   147 S63_AY682550  
148 GII.P31
 (7)
CUHK-NS-2200_MN400355   148 SaitamaT49_KJ196277  
149 CUHK-NS-682_KT589391   149 SaitamaT52_KJ196288  
150 IPH2172-09VG4_JF697282   150 GII.6
 (14)
14-55_KX158281  
151 Osaka_AB434770   151 30443_KM198534  
152 PunePC51_EU921388   152 Belgium-4_MN248516  
153 Sydney_JX459908   153 GZ2010-L96Guangzhou_JX989075  
154 WoononaNSW3309_JX459907   154 Mahoning0050_PV174245  
155 GII.P32
 (2)
HenrytonSP17_MF405169   155 Miami292_AF414410  
156 S63_AY682550   156 NewYork0007_PV174244  
157 GII.P33
 (2)
Ascension208_JN797508   157 S9c_KC576910  
158 StGeorge_GQ845370   158 SaitamaU16_AB039778  
159 GII.P34
 (2)
OC97007_AB089882   159 SaitamaU4_AB039777  
160 SaitamaE24_KF730316   160 Seacroft_AJ277620  
161 GII.P35
 (2)
B17_KC576911   161 Shizuoka8913_HM633213  
162 E3_AY682552   162 TCHE99-13646_GU930737  
163 GII.P36
 (2)
OC96065_AF315813   163 Tokyo_AB684664  
164 Tokyo_AB684664   164 GII.7
 (6)
236_MH218692  
165 GII.P37
 (2)
Amsterdam3_KJ194507   165 CHDC3936_JX846926  
166 PunePC24_EU921353   166 Gwynedd273_AF414409  
167 GII.P38
 (2)
Beijing53931_GQ856469   167 Leeds_AJ277608  
168 Seoul0922_HM635128   168 OsakaF140_AB258331  
169 GII.P39 CHDC5191_FJ537134   169 TAKAsanKimchi_KJ196295  
170 GII.P40
 (3)
Hokkaido133_AB212306   170 GII.8
 (2)
Amsterdam9818_AF195848  
171 OsakaNI_DQ366347   171 SaitamaU25_AB039780  
172 SaitamaT49_KJ196277   172 GII.9
 (2)
GoulburnValleyG5175C_DQ379715  
173 GII.P41
 (2)
GoulburnValleyG5175B_DQ379714   173 VA97207_AY038599  
174 HK71_JX846924   174 GII.10
 (3)
Erfurt546_AF427118  
175 GII.PNA1 Loreto1257_MG495079   175 Mc37_AY237415  
176 GII.PNA2 PNV06929_MG706448   176 Vietnam026_AF504671  
177 GII.PNA3 CHDC2094_FJ537135   177 GII.11
 (2)
Sw43_AB126320  
178 GII.PNA4 Sw918_AB074893   178 Sw918_AB074893  
179 GII.PNA5 Dhaka1940_MG495082   179 GII.12
 (5)
No35-Saitama-99-1_LC342059  
180 GII.PNA6 Arg13099_KX061540   180 PunePC24_EU921353  
181 GII.PNA7 No35-Saitama-99-1_LC342059   181 SaitamaU1_AB039775  
182 GII.PNA8 Empangeni10403_KR904229   182 StGeorge_GQ845370  
183 GII.PNA9 Arg15813_MK733205   183 Wortley_AJ277618  
184 GIV.P1
 (3)
FortLauderdale_AF414426   184 GII.13
 (5)
Empangeni10403_KR904229  
185 LakeMacquarie_JQ613567   185 Fayetteville_AY113106  
186 SaintCloud_AF414427   186 GoulburnValleyG5175B_DQ379714  
187 GIV.PNA1 WI7002_KX907728   187 PunePC25_EU921354  
188 SaitamaT80_KJ196276  
189 GII.14
 (6)
Beijing55028_GQ856465  
190 M7_AY130761  
191 Maizuru8533_GU017903  
192 PV-Voelk0017_KM289171  
193 Saga8610_GU594162  
194 SendaiYG99_KJ196278  
195 GII.16
 (3)
Hiram_AY502006  
196 Neustrelitz260_AY772730  
197 Tiffin_AY502010  
198 GII.17
 (13)
13BH1_KJ156329  
199 3351_MK789431  
200 446222_OP805362  
201 Arg13099_KX061540  
202 Briancon870_EF529741  
203 CA-RGDS-1180_OR685283  
204 CA_OP689689  
205 CS-E1_AY502009  
206 CUHK-NS-682_KT589391  
207 Katrina-17_DQ438972  
208 Kawasaki308_LC037415  
209 Kawasaki323_AB983218  
210 SaitamaT87_KJ196286  
211 GII.18
 (2)
OH-QW101_AY823304  
212 OH-QW125_AY823305  
213 GII.19 OH-QW170_AY823306  
214 GII.20
 (4)
Gothenburg_EU275779  
215 Leverkusen267_EU424333  
216 Luckewalde591_EU373815  
217 OC071182007_AB542917  
218 GII.21
 (3)
IF1998_AY675554  
219 KawasakiYO284_KJ196284  
220 Salisbury150_JN899245  
221 GII.22
 (3)
Dhaka1940_MG495082  
222 MinatoN16_AB233471  
223 Yuri_AB083780  
224 GII.23
 (3)
Loreto1847_KT290889  
225 Loreto6422_MG495080  
226 Quininde1906_KR232647  
227 GII.24
 (2)
EdenPrairie5457_MG495084  
228 Loreto1972_KY225989  
229 GII.25
 (3)
Beijing53931_GQ856469  
230 Dhaka1928_MG495083  
231 Seoul0922_HM635128  
232 GII.26
 (2)
Leipzig07788a_MF352142  
233 Leon4509_KU306738  
234 GII.27
 (3)
Arg15813_MK733205  
235 Loreto0959_MG495077  
236 Loreto1041_MG495078  
237 GII.ancestral Tokyo68-4_AB684728  
238 GII.NA1 Loreto1257_MG495079  
239 GII.NA2 PNV06929_MG706448  
240 GIV.1
 (10)
Ahrenshoop246_JQ970479  
241 Alph23_DQ093067  
242 Alphatron_AF195847  
243 CCDCGR1113-59_KC894731  
244 Canet-en-Roussillon_KT030674  
245 FortLauderdale_AF414426  
246 Italy980_FM865412  
247 LakeMacquarie_JQ613567  
248 OC01017023_LC101824  
249 SaintCloud_AF414427  
250 GIV.NA1 WI7002_KX907728  
251 GVIII.1
 (3)
Chiba-040502_AJ844470  
252 Tokyo2-18_AB985418  
253 Yuzawa-Gira2HS_KJ196291  
254 GIX.1
 (5)
Beijing55161_GQ856474  
255 Hiroshima66_AB360387  
256 J23_AY130762  
257 Mex7076_AF542090  
258 SapporoHK299_KJ196290  

Last updated: March 21, 2025