Typing tool

Reference sequences

Norovirus (215) Sapovirus (130)
polymerase (RdRp) - 167 capsid (VP1) - 212 capsid (VP1)
1 GI.P1
 (4)
Gothenburg_EU085529   1 GI.1
 (4)
Gothenburg_EU085529   1 GI.1
 (19)
Chanthaburi74_AY646854
2 Norwalk_M87661   2 Norwalk_M87661   2 Dresden_AY694184
3 SRSV-KY-8989J_L23828   3 SRSV-KY-8989J_L23828   3 Hunan_KX980412
4 V1622-06_AB447406   4 V1622-06_AB447406   4 Lima_1845_MG012398
5 GI.P2
 (2)
Leuven_FJ515294   5 GI.2
 (3)
Constellation59_AF435807   5 Lima_1863_MG012439
6 Southampton_L07418   6 Leuven_FJ515294   6 Lima_1870_MG012436
7 GI.P3
 (3)
CHDC116_JX846929   7 Southampton_L07418   7 Manchester_X86560
8 ShimizuKK2866_KJ196292   8 GI.3
 (16)
Akabane991130_EF547396   8 Mc114_AY237422
9 VA98115_AY038598   9 Beijing54108_GQ856470   9 N21_AY237423
10 GI.P4
 (4)
Beijing55169_GQ856475   10 Beijing54114_GQ856471   10 Nashville_9427_MG012397
11 Chiba407_AB042808   11 Beijing54660_GQ856472   11 Nashville_9432_MG012437
12 Groningen_LN854563   12 Beijing55042_GQ856473   12 Nashville_9478_MG012438
13 Queensarmsleeds92_AJ313030   13 CHDC116_JX846929   13 Nashville_9491_MG012400
14 GI.P5
 (2)
AppalachicolaBay318_AF414406   14 DesertShield395_U04469   14 Nashville_9691-1_MG012435
15 Siklos-HUN5407_KJ402295   15 Muenster702_KM289169   15 NongKhai50_AY646853
16 GI.P6
 (2)
14-BC-1_KP027330   16 OS-32_LC122713   16 Portland_3639_MG012399
17 BS5(Hesse)_AF093797   17 Otofuke_AB187514   17 SapporoMT-2010_HM002617
18 GI.P7
 (3)
AlbertaEI404_KU311161   18 Potsdam196_AF439267   18 SeoulROK62_KP298674
19 LillaEdetS5b_JN603251   19 ShimizuKK2866_KJ196292   19 Zhejiang1_KT327081
20 Providence_JN899243   20 Stavanger_AF145709   20 GI.2
 (7)
BE-HPI01_JX993277
21 GI.P8
 (2)
KolkataL8775_AB290150   21 V170707_AB447414   21 BR-DF01_AB614356
22 NagoyaKY531_KJ196298   22 VA98115_AY038598   22 Nashville_9411_MG012440
23 GI.P9
 (3)
CAIQ12110628_KF586507   23 Vesoul576_EF529738   23 Oakland_3023_MG012442
24 LillaEdetS48_JN183159   24 GI.4
 (5)
Beijing55169_GQ856475   24 Oakland_6371_MG012441
25 Vancouver730_HQ637267   25 Chiba407_AB042808   25 Parkville_U73124
26 GI.P10
 (2)
Beijing55042_GQ856473   26 Groningen_LN854563   26 Potsdam_AF294739
27 DesertShield395_U04469   27 Koblenz433_AF394960   27 GI.3
 (4)
Chiba010658_AJ606696
28 GI.P11
 (3)
Beijing53997_GQ856463   28 Queensarmsleeds92_AJ313030   28 OB2015_1927_MG012401
29 Beijing55063_GQ856464   29 GI.5
 (6)
AppalachicolaBay318_AF414406   29 OH08021_AB623037
30 Hiroshima48-938_AB354289   30 Musgrove_AJ277614   30 Stockholm318_AF194182
31 GI.P12
 (2)
SzUG1_AB039774   31 OC020180_LC101825   31 GI.4 Chiba000496_AJ606693
32 Yiwu-CB1_MH443711   32 Siklos-HUN5407_KJ402295   32 GI.5
 (3)
Ehime2K-814_AJ606698
33 GI.P13
 (4)
Beijing54108_GQ856470   33 SzUG1_AB039774   33 Ehime643_DQ366345
34 Beijing54114_GQ856471   34 Yiwu-CB1_MH443711   34 Yokote1_AB253740
35 Beijing54660_GQ856472   35 GI.6
 (9)
14-BC-1_KP027330   35 GI.6
 (4)
Chiba000764_AJ606694
36 Vesoul576_EF529738   36 BS5(Hesse)_AF093797   36 Nashville_9367_MG012443
37 GI.P14
 (2)
Muenster702_KM289169   37 Beijing53997_GQ856463   37 Nichinan_AB455803
38 Otofuke_AB187514   38 Beijing55063_GQ856464   38 Tokyo08-2439_AB622435
39 GI.PNA1 WUG1_AB081723   39 Hiroshima48-938_AB354289   39 GI.7
 (2)
D1714_AB522390
40 GI.PNA2
 (2)
Dhaka1882_MH130046   40 No20-Saitama-98-17_LC342057   40 Ehime041680_AB258428
41 NizhnyNovgorod_FJ383816   41 Sindlesham_AJ277615   41 GII.1
 (16)
Bristol_AJ249939
42 GI.PNA3 V170707_AB447414   42 VA497_AF538678   42 Chiba020003_AJ606692
43 GI.PNA4 No20-Saitama-98-17_LC342057   43 WUG1_AB081723   43 Ehime2K-1948_AJ786351
44 GII.P1 Hawaii_U07611   44 GI.7
 (8)
AlbertaEI404_KU311161   44 London29845_U95645
45 GII.P2
 (2)
MK04_DQ456824   45 Chiba030100_AJ844469   45 Lyon598_AJ271056
46 Melksham_X81879   46 Dhaka1882_MH130046   46 Mc2_AY237419
47 GII.P3
 (3)
Amsterdam1_KJ194500   47 IF2036_AY675555   47 Nashville_9343_MG012444
48 MX_U22498   48 LillaEdetS5b_JN603251   48 Nashville_9346_MG012445
49 Toronto_U02030   49 NizhnyNovgorod_FJ383816   49 Nashville_9353_MG012404
50 GII.P4 Den Haag
 (2)
DenHaag_EF126965   50 Providence_JN899243   50 Nashville_9360_MG012402
51 Shimane2_AB541348   51 Winchester_AJ277609   51 Nashville_9385_MG012409
52 GII.P4 Farmington Hills
 (2)
FarmingtonHills_AY502023   52 GI.8
 (2)
Boxer_AF538679   52 Nashville_9422_MG012403
53 Langen1061_AY485642   53 NagoyaKY531_KJ196298   53 Nashville_9510_MG012406
54 GII.P4 Hunter
 (2)
Chiba04-1008_AB220926   54 GI.9
 (3)
CAIQ12110628_KF586507   54 Nashville_9511_MG012405
55 Hunter504D04O_DQ078814   55 LillaEdetS48_JN183159   55 Nashville_9525_MG012407
56 GII.P4
New Orleans
 (4)
Hokkaido3_AB933767   56 Vancouver730_HQ637267   56 Nashville_9691-2_MG012408
57 NSW001P_GQ845367   57 GI.ancestral Tokyo45-5_AB684696   57 GII.2
 (8)
Chiba990727_AJ606689
58 NewOrleans_GU445325   58 GII.1
 (5)
Amsterdam3_KJ194507   58 Mc10_AY237420
59 WI-467121_KX354134   59 Ascension208_JN797508   59 Mex340_AF435812
60 GII.P4 US95-96
 (2)
Saitama_AB112306   60 Dillingen391_AF425767   60 Nashville_9331_MG012411
61 US95-96_AF414424   61 Hawaii_U07611   61 Nashville_9393_MG012412
62 GII.P4 Yerseke
 (2)
Isumi060936_AB294790   62 Picton_AY919139   62 Nashville_9521_MG012410
63 Yerseke_EF126963   63 GII.2
 (12)
E3_AY682552   63 Nashville_9795_MG012413
64 GII.P5 SaitamaT52_KJ196288   64 HenrytonSP17_MF405169   64 Siaya2158_MH922774
65 GII.P6
 (2)
GZ2010-L96Guangzhou_JX989075   65 KL109_JX846925   65 GII.3
 (13)
13-3-2_KM092509
66 SaitamaU16_AB039778   66 MK04_DQ456824   66 20082029_AB630068
67 GII.P7
 (18)
14-55_KX158281   67 Melksham_X81879   67 C12_AY603425
68 236_MH218692   68 OC97007_AB089882   68 Chiba040507_AJ786350
69 30443_KM198534   69 OsakaNI_DQ366347   69 Kushiro5_AB455793
70 Beijing55028_GQ856465   70 PontdeRoide673_AY682549   70 Leon_6701_MG012414
71 Belgium-4_MN248516   71 SaitamaE24_KF730316   71 Leon_6708_MG012416
72 GoulburnValleyG5175C_DQ379715   72 SantaRosa1764_KY865306   72 Lima_1856_MG012417
73 Gwynedd273_AF414409   73 SnowMountain_AY134748   73 Nashville_9354_MG012419
74 Maizuru8533_GU017903   74 Vaals_AB281090   74 Nashville_9513_MG012418
75 Miami292_AF414410   75 GII.3
 (13)
109_MH218579   75 Nashville_9517_MG012415
76 OC071182007_AB542917   76 Amsterdam1_KJ194500   76 Nayoro4_AB455794
77 PV-Voelk0017_KM289171   77 Arg320_AF190817   77 Sydney53_DQ104360
78 S9c_KC576910   78 HK71_JX846924   78 GII.4
 (3)
Kumamoto6_AB429084
79 Saga8610_GU594162   79 Herzberg385_AF539439   79 Lima_1873_MG012446
80 SaitamaU4_AB039777   80 IPH2172-09VG4_JF697282   80 PHL-TGO12-028_KP067444
81 SendaiYG99_KJ196278   81 MX_U22498   81 GII.5
 (6)
Cruiseship_AY289804
82 TAKAsanKimchi_KJ196295   82 Milwaukee009_JN565063   82 Lima_1868_MG012451
83 TCHE99-13646_GU930737   83 NSW730O_KT239614   83 Nashville_9349_MG012447
84 VA97207_AY038599   84 RotterdamE1300327_MF140689   84 Nashville_9387_MG012449
85 GII.P8
 (2)
CHDC3936_JX846926   85 RotterdamP1D0_AB385626   85 Santa_Rosa_3693_MG012450
86 SaitamaU25_AB039780   86 SN2000JA_AB190457   86 Santa_Rosa_3812_MG012448
87 GII.P11
 (2)
OH-QW170_AY823306   87 Toronto_U02030   87 GII.6 Sakaeo15_AY646855
88 Sw43_AB126320   88 GII.4
 (2)
CHDC2094_FJ537135   88 GII.7 20072248_AB630067
89 GII.P12
 (5)
Asia_AB220921   89 CHDC5191_FJ537134   89 GII.8
 (2)
Monterey_6283_MG012453
90 Mc37_AY237415   90 GII.4 Asia
 (2)
Asia_AB220921   90 Monterey_6284_MG012452
91 SaitamaT80_KJ196276   91 Sakai04179_AB220922   91 GII.NA1 Siaya2345_MH922772
92 SaitamaU1_AB039775   92 GII.4
Den Haag
 (3)
DenHaag_EF126965   92 GIV.1
 (30)
Angelholm-SW278_DQ125333
93 Sakai04179_AB220922   93 Minerva_EU078417   93 Angelholm-SW314_DQ125334
94 GII.P13
 (2)
Briancon870_EF529741   94 Shimane2_AB541348   94 Ehime1107_DQ058829
95 PunePC25_EU921354   95 GII.4 Farmington Hills
 (2)
FarmingtonHills_AY502023   95 Ehime1596_DQ366346
96 GII.P15
 (2)
Beijing55161_GQ856474   96 Langen1061_AY485642   96 Leon_1751_MG012454
97 SapporoHK299_KJ196290   97 GII.4 Hong Kong CUHK-NS-2200_MN400355   97 Lima_1858_MG012420
98 GII.P16
 (6)
CS-E1_AY502009   98 GII.4
Hunter
 (3)
Chiba04-1008_AB220926   98 Lima_1861_MG012429
99 Neustrelitz260_AY772730   99 Hunter504D04O_DQ078814   99 Lima_1862_MG012461
100 OH16002_LC153121   100 Hunter_AY883096   100 Lima_1864_MG012462
101 SaitamaT87_KJ196286   101 GII.4
New Orleans
 (4)
Hokkaido3_AB933767   101 Lima_1865_MG012463
102 SantaRosa1764_KY865306   102 NSW001P_GQ845367   102 Lima_1869_MG012431
103 Tiffin_AY502010   103 NewOrleans_2010-SP-0870_KX353972   103 Lima_1871_MG012432
104 GII.P17
 (2)
Kawasaki308_LC037415   104 NewOrleans_GU445325   104 Nashville_9327_MG012430
105 Kawasaki323_AB983218   105 GII.4 Osaka
 (2)
Osaka_AB434770   105 Nashville_9489_MG012421
106 GII.P18
 (2)
OH-QW101_AY823304   106 PunePC51_EU921388   106 Portland_3587_MG012425
107 OH-QW125_AY823305   107 GII.4
Sydney
 (4)
OH16002_LC153121   107 Portland_3602_MG012428
108 GII.P20 Leverkusen267_EU424333   108 Sydney_JX459908   108 Portland_3629_MG012424
109 GII.P21
 (7)
109_MH218579   109 WI-467121_KX354134   109 Portland_3631_MG012459
110 Herzberg385_AF539439   110 WoononaNSW3309_JX459907   110 Portland_3632_MG012423
111 KawasakiYO284_KJ196284   111 GII.4
US95-96
 (3)
Saitama_AB112306   111 Portland_3633_MG012427
112 NSW730O_KT239614   112 US95-96_AF414424   112 Portland_3636_MG012426
113 Picton_AY919139   113 US95-96_AJ004864   113 Portland_3641_MG012457
114 PontdeRoide673_AY682549   114 GII.4 Yerseke
 (2)
Isumi060936_AB294790   114 Portland_3643_MG012458
115 RotterdamE1300327_MF140689   115 Yerseke_EF126963   115 Portland_3644_MG012422
116 GII.P22 Yuri_AB083780   116 GII.5
 (4)
Hillingdon_AJ277607   116 Portland_3649_MG012456
117 GII.P23
 (2)
Loreto1847_KT290889   117 S63_AY682550   117 Portland_3651_MG012455
118 Loreto6422_MG495080   118 SaitamaT49_KJ196277   118 Quetzaltenago_3711_MG012460
119 GII.P24
 (2)
EdenPrairie5457_MG495084   119 SaitamaT52_KJ196288   119 Sydney3_DQ104357
120 Loreto1972_KY225989   120 GII.6
 (12)
14-55_KX158281   120 Yakumo8_AB455795
121 GII.P25 Dhaka1928_MG495083   121 30443_KM198534   121 Hou7-1181_AF435814
122 GII.P26
 (2)
Leipzig07788a_MF352142   122 Belgium-4_MN248516   122 GV.1
 (7)
Arg39_AY289803
123 Leon4509_KU306738   123 GZ2010-L96Guangzhou_JX989075   123 Ehime01-1669_AJ606699
124 GII.P27 Loreto0959_MG495077   124 Miami292_AF414410   124 Ehime475_DQ366344
125 GII.P28 Yuzawa-Gira2HS_KJ196291   125 S9c_KC576910   125 Ishikawa03-158_AJ786352
126 GII.P29
 (2)
Arg320_AF190817   126 SaitamaU16_AB039778   126 Nashville_9424_MG012433
127 SN2000JA_AB190457   127 SaitamaU4_AB039777   127 Nashville_9492_MG012434
128 GII.P30
 (2)
KL109_JX846925   128 Seacroft_AJ277620   128 NongKhai24_AY646856
129 SnowMountain_AY134748   129 Shizuoka8913_HM633213   129 GV.2
 (2)
NagoyaNGY1_AB775659
130 GII.P31
 (7)
CUHK-NS-2200_MN400355   130 TCHE99-13646_GU930737   130 Sollentuna_KY040366
131 CUHK-NS-682_KT589391   131 Tokyo_AB684664  
132 IPH2172-09VG4_JF697282   132 GII.7
 (5)
236_MH218692  
133 Osaka_AB434770   133 CHDC3936_JX846926  
134 PunePC51_EU921388   134 Gwynedd273_AF414409  
135 Sydney_JX459908   135 Leeds_AJ277608  
136 WoononaNSW3309_JX459907   136 TAKAsanKimchi_KJ196295  
137 GII.P32
 (2)
HenrytonSP17_MF405169   137 GII.8
 (2)
Amsterdam9818_AF195848  
138 S63_AY682550   138 SaitamaU25_AB039780  
139 GII.P33
 (2)
Ascension208_JN797508   139 GII.9
 (2)
GoulburnValleyG5175C_DQ379715  
140 StGeorge_GQ845370   140 VA97207_AY038599  
141 GII.P34
 (2)
OC97007_AB089882   141 GII.10
 (2)
Erfurt546_AF427118  
142 SaitamaE24_KF730316   142 Mc37_AY237415  
143 GII.P35
 (2)
B17_KC576911   143 GII.11
 (2)
Sw43_AB126320  
144 E3_AY682552   144 Sw918_AB074893  
145 GII.P36
 (2)
OC96065_AF315813   145 GII.12
 (5)
No35-Saitama-99-1_LC342059  
146 Tokyo_AB684664   146 PunePC24_EU921353  
147 GII.P37
 (2)
Amsterdam3_KJ194507   147 SaitamaU1_AB039775  
148 PunePC24_EU921353   148 StGeorge_GQ845370  
149 GII.P38 Beijing53931_GQ856469   149 Wortley_AJ277618  
150 GII.P39 CHDC5191_FJ537134   150 GII.13
 (5)
Empangeni10403_KR904229  
151 GII.P40
 (2)
OsakaNI_DQ366347   151 Fayetteville_AY113106  
152 SaitamaT49_KJ196277   152 GoulburnValleyG5175B_DQ379714  
153 GII.P41
 (2)
GoulburnValleyG5175B_DQ379714   153 PunePC25_EU921354  
154 HK71_JX846924   154 SaitamaT80_KJ196276  
155 GII.PNA1 Loreto1257_MG495079   155 GII.14
 (6)
Beijing55028_GQ856465  
156 GII.PNA2 PNV06929_MG706448   156 M7_AY130761  
157 GII.PNA3 CHDC2094_FJ537135   157 Maizuru8533_GU017903  
158 GII.PNA4 Sw918_AB074893   158 PV-Voelk0017_KM289171  
159 GII.PNA5 Dhaka1940_MG495082   159 Saga8610_GU594162  
160 GII.PNA6 Arg13099_KX061540   160 SendaiYG99_KJ196278  
161 GII.PNA7 No35-Saitama-99-1_LC342059   161 GII.16
 (3)
Hiram_AY502006  
162 GII.PNA8 Empangeni10403_KR904229   162 Neustrelitz260_AY772730  
163 GII.PNA9 Arg15813_MK733205   163 Tiffin_AY502010  
164 GIV.P1
 (3)
FortLauderdale_AF414426   164 GII.17
 (8)
Arg13099_KX061540  
165 LakeMacquarie_JQ613567   165 Briancon870_EF529741  
166 SaintCloud_AF414427   166 CS-E1_AY502009  
167 GIV.PNA1 WI7002_KX907728   167 CUHK-NS-682_KT589391  
168 Katrina-17_DQ438972  
169 Kawasaki308_LC037415  
170 Kawasaki323_AB983218  
171 SaitamaT87_KJ196286  
172 GII.18
 (2)
OH-QW101_AY823304  
173 OH-QW125_AY823305  
174 GII.19 OH-QW170_AY823306  
175 GII.20
 (3)
Leverkusen267_EU424333  
176 Luckewalde591_EU373815  
177 OC071182007_AB542917  
178 GII.21
 (2)
IF1998_AY675554  
179 KawasakiYO284_KJ196284  
180 GII.22
 (2)
Dhaka1940_MG495082  
181 Yuri_AB083780  
182 GII.23
 (2)
Loreto1847_KT290889  
183 Loreto6422_MG495080  
184 GII.24
 (2)
EdenPrairie5457_MG495084  
185 Loreto1972_KY225989  
186 GII.25
 (2)
Beijing53931_GQ856469  
187 Dhaka1928_MG495083  
188 GII.26
 (2)
Leipzig07788a_MF352142  
189 Leon4509_KU306738  
190 GII.27
 (2)
Arg15813_MK733205  
191 Loreto0959_MG495077  
192 GII.ancestral Tokyo68-4_AB684728  
193 GII.NA1 Loreto1257_MG495079  
194 GII.NA2 PNV06929_MG706448  
195 GIV.1
 (10)
Ahrenshoop246_JQ970479  
196 Alph23_DQ093067  
197 Alphatron_AF195847  
198 CCDCGR1113-59_KC894731  
199 Canet-en-Roussillon_KT030674  
200 FortLauderdale_AF414426  
201 Italy980_FM865412  
202 LakeMacquarie_JQ613567  
203 OC01017023_LC101824  
204 SaintCloud_AF414427  
205 GIV.NA1 WI7002_KX907728  
206 GVIII.1
 (3)
Chiba-040502_AJ844470  
207 Tokyo2-18_AB985418  
208 Yuzawa-Gira2HS_KJ196291  
209 GIX.1
 (4)
Beijing55161_GQ856474  
210 J23_AY130762  
211 Mex7076_AF542090  
212 SapporoHK299_KJ196290  

Page last reviewed: October 26, 2022