Human calicivirus
Typing tool
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Reference sequences
Complete genomes
Sapovirus genogroup II capsid (VP1)
GenBank
1
GII.1
(16)
Bristol_
AJ249939
2
Chiba020003_
AJ606692
3
Ehime2K-1948_
AJ786351
4
London29845_
U95645
5
Lyon598_
AJ271056
6
Mc2_
AY237419
7
Nashville_9343_
MG012444
8
Nashville_9346_
MG012445
9
Nashville_9353_
MG012404
10
Nashville_9360_
MG012402
11
Nashville_9385_
MG012409
12
Nashville_9422_
MG012403
13
Nashville_9510_
MG012406
14
Nashville_9511_
MG012405
15
Nashville_9525_
MG012407
16
Nashville_9691-2_
MG012408
17
GII.2
(8)
Chiba990727_
AJ606689
18
Mc10_
AY237420
19
Mex340_
AF435812
20
Nashville_9331_
MG012411
21
Nashville_9393_
MG012412
22
Nashville_9521_
MG012410
23
Nashville_9795_
MG012413
24
Siaya2158_
MH922774
25
GII.3
(13)
13-3-2_
KM092509
26
20082029_
AB630068
27
C12_
AY603425
28
Chiba040507_
AJ786350
29
Kushiro5_
AB455793
30
Leon_6701_
MG012414
31
Leon_6708_
MG012416
32
Lima_1856_
MG012417
33
Nashville_9354_
MG012419
34
Nashville_9513_
MG012418
35
Nashville_9517_
MG012415
36
Nayoro4_
AB455794
37
Sydney53_
DQ104360
38
GII.4
(3)
Kumamoto6_
AB429084
39
Lima_1873_
MG012446
40
PHL-TGO12-028_
KP067444
41
GII.5
(6)
Cruiseship_
AY289804
42
Lima_1868_
MG012451
43
Nashville_9349_
MG012447
44
Nashville_9387_
MG012449
45
Santa_Rosa_3693_
MG012450
46
Santa_Rosa_3812_
MG012448
47
GII.6
Sakaeo15_
AY646855
48
GII.7
20072248_
AB630067
49
GII.8
(2)
Monterey_6283_
MG012453
50
Monterey_6284_
MG012452
51
GII.NA1
Siaya2345_
MH922772
Sapovirus genogroup II capsid phylogenetic tree
The tree was computed from amino acid sequence alignment using maximum likelihood (ML) method with PhyML software and was plotted and edited in FigTree graphical viewer.
Last updated: March 26, 2024