Typing tool

Sapovirus genogroup II capsid (VP1)   GenBank
1 GII.1
 (16)
Bristol_AJ249939
2 Chiba020003_AJ606692
3 Ehime2K-1948_AJ786351
4 London29845_U95645
5 Lyon598_AJ271056
6 Mc2_AY237419
7 Nashville_9343_MG012444
8 Nashville_9346_MG012445
9 Nashville_9353_MG012404
10 Nashville_9360_MG012402
11 Nashville_9385_MG012409
12 Nashville_9422_MG012403
13 Nashville_9510_MG012406
14 Nashville_9511_MG012405
15 Nashville_9525_MG012407
16 Nashville_9691-2_MG012408
17 GII.2
 (8)
Chiba990727_AJ606689
18 Mc10_AY237420
19 Mex340_AF435812
20 Nashville_9331_MG012411
21 Nashville_9393_MG012412
22 Nashville_9521_MG012410
23 Nashville_9795_MG012413
24 Siaya2158_MH922774
25 GII.3
 (13)
13-3-2_KM092509
26 20082029_AB630068
27 C12_AY603425
28 Chiba040507_AJ786350
29 Kushiro5_AB455793
30 Leon_6701_MG012414
31 Leon_6708_MG012416
32 Lima_1856_MG012417
33 Nashville_9354_MG012419
34 Nashville_9513_MG012418
35 Nashville_9517_MG012415
36 Nayoro4_AB455794
37 Sydney53_DQ104360
38 GII.4
 (3)
Kumamoto6_AB429084
39 Lima_1873_MG012446
40 PHL-TGO12-028_KP067444
41 GII.5
 (6)
Cruiseship_AY289804
42 Lima_1868_MG012451
43 Nashville_9349_MG012447
44 Nashville_9387_MG012449
45 Santa_Rosa_3693_MG012450
46 Santa_Rosa_3812_MG012448
47 GII.6 Sakaeo15_AY646855
48 GII.7 20072248_AB630067
49 GII.8
 (2)
Monterey_6283_MG012453
50 Monterey_6284_MG012452
51 GII.NA1 Siaya2345_MH922772
Sapovirus genogroup II capsid phylogenetic tree

 
The tree was computed from amino acid sequence alignment using maximum likelihood (ML) method with PhyML software and was plotted and edited in FigTree graphical viewer.

Page last reviewed: October 26, 2022