Typing tool

Sapovirus genogroup I capsid (VP1)   GenBank
1 GI.1
 (19)
Chanthaburi74_AY646854
2 Dresden_AY694184
3 Hunan_KX980412
4 Lima_1845_MG012398
5 Lima_1863_MG012439
6 Lima_1870_MG012436
7 Manchester_X86560
8 Mc114_AY237422
9 N21_AY237423
10 Nashville_9427_MG012397
11 Nashville_9432_MG012437
12 Nashville_9478_MG012438
13 Nashville_9491_MG012400
14 Nashville_9691-1_MG012435
15 NongKhai50_AY646853
16 Portland_3639_MG012399
17 SapporoMT-2010_HM002617
18 SeoulROK62_KP298674
19 Zhejiang1_KT327081
20 GI.2
 (7)
BE-HPI01_JX993277
21 BR-DF01_AB614356
22 Nashville_9411_MG012440
23 Oakland_3023_MG012442
24 Oakland_6371_MG012441
25 Parkville_U73124
26 Potsdam_AF294739
27 GI.3
 (4)
Chiba010658_AJ606696
28 OB2015_1927_MG012401
29 OH08021_AB623037
30 Stockholm318_AF194182
31 GI.4 Chiba000496_AJ606693
32 GI.5
 (3)
Ehime2K-814_AJ606698
33 Ehime643_DQ366345
34 Yokote1_AB253740
35 GI.6
 (4)
Chiba000764_AJ606694
36 Nashville_9367_MG012443
37 Nichinan_AB455803
38 Tokyo08-2439_AB622435
39 GI.7
 (2)
D1714_AB522390
40 Ehime041680_AB258428
Sapovirus genogroup I capsid phylogenetic tree

 
The tree was computed from amino acid sequence alignment using maximum likelihood (ML) method with PhyML software and was plotted and edited in FigTree graphical viewer.

Page last reviewed: October 26, 2022