Human calicivirus
Typing tool
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Reference sequences
Complete genomes
Norovirus genogroup II polymerase (RdRp)
GenBank
1
GII.P1
Hawaii_
U07611
2
GII.P2
(2)
MK04_
DQ456824
3
Melksham_
X81879
4
GII.P3
(3)
Amsterdam1_
KJ194500
5
MX_
U22498
6
Toronto_
U02030
7
GII.P4 Den Haag
(2)
DenHaag_
EF126965
8
Shimane2_
AB541348
9
GII.P4 Farmington Hills
(2)
FarmingtonHills_
AY502023
10
Langen1061_
AY485642
11
GII.P4 Hunter
(2)
Chiba04-1008_
AB220926
12
Hunter504D04O_
DQ078814
13
GII.P4
New Orleans
(4)
Hokkaido3_
AB933767
14
NSW001P_
GQ845367
15
NewOrleans_
GU445325
16
WI-467121_
KX354134
17
GII.P4 US95-96
(2)
Saitama_
AB112306
18
US95-96_
AF414424
19
GII.P4 Yerseke
(2)
Isumi060936_
AB294790
20
Yerseke_
EF126963
21
GII.P5
SaitamaT52_
KJ196288
22
GII.P6
(2)
GZ2010-L96Guangzhou_
JX989075
23
SaitamaU16_
AB039778
24
GII.P7
(18)
14-55_
KX158281
25
236_
MH218692
26
30443_
KM198534
27
Beijing55028_
GQ856465
28
Belgium-4_
MN248516
29
GoulburnValleyG5175C_
DQ379715
30
Gwynedd273_
AF414409
31
Maizuru8533_
GU017903
32
Miami292_
AF414410
33
OC071182007_
AB542917
34
PV-Voelk0017_
KM289171
35
S9c_
KC576910
36
Saga8610_
GU594162
37
SaitamaU4_
AB039777
38
SendaiYG99_
KJ196278
39
TAKAsanKimchi_
KJ196295
40
TCHE99-13646_
GU930737
41
VA97207_
AY038599
42
GII.P8
(2)
CHDC3936_
JX846926
43
SaitamaU25_
AB039780
44
GII.P11
(2)
OH-QW170_
AY823306
45
Sw43_
AB126320
46
GII.P12
(5)
Asia_
AB220921
47
Mc37_
AY237415
48
SaitamaT80_
KJ196276
49
SaitamaU1_
AB039775
50
Sakai04179_
AB220922
51
GII.P13
(2)
Briancon870_
EF529741
52
PunePC25_
EU921354
53
GII.P15
(2)
Beijing55161_
GQ856474
54
SapporoHK299_
KJ196290
55
GII.P16
(6)
CS-E1_
AY502009
56
Neustrelitz260_
AY772730
57
OH16002_
LC153121
58
SaitamaT87_
KJ196286
59
SantaRosa1764_
KY865306
60
Tiffin_
AY502010
61
GII.P17
(3)
CA_
OP689689
62
Kawasaki308_
LC037415
63
Kawasaki323_
AB983218
64
GII.P18
(2)
OH-QW101_
AY823304
65
OH-QW125_
AY823305
66
GII.P20
Leverkusen267_
EU424333
67
GII.P21
(7)
109_
MH218579
68
Herzberg385_
AF539439
69
KawasakiYO284_
KJ196284
70
NSW730O_
KT239614
71
Picton_
AY919139
72
PontdeRoide673_
AY682549
73
RotterdamE1300327_
MF140689
74
GII.P22
Yuri_
AB083780
75
GII.P23
(2)
Loreto1847_
KT290889
76
Loreto6422_
MG495080
77
GII.P24
(2)
EdenPrairie5457_
MG495084
78
Loreto1972_
KY225989
79
GII.P25
Dhaka1928_
MG495083
80
GII.P26
(2)
Leipzig07788a_
MF352142
81
Leon4509_
KU306738
82
GII.P27
Loreto0959_
MG495077
83
GII.P28
Yuzawa-Gira2HS_
KJ196291
84
GII.P29
(2)
Arg320_
AF190817
85
SN2000JA_
AB190457
86
GII.P30
(2)
KL109_
JX846925
87
SnowMountain_
AY134748
88
GII.P31
(7)
CUHK-NS-2200_
MN400355
89
CUHK-NS-682_
KT589391
90
IPH2172-09VG4_
JF697282
91
Osaka_
AB434770
92
PunePC51_
EU921388
93
Sydney_
JX459908
94
WoononaNSW3309_
JX459907
95
GII.P32
(2)
HenrytonSP17_
MF405169
96
S63_
AY682550
97
GII.P33
(2)
Ascension208_
JN797508
98
StGeorge_
GQ845370
99
GII.P34
(2)
OC97007_
AB089882
100
SaitamaE24_
KF730316
101
GII.P35
(2)
B17_
KC576911
102
E3_
AY682552
103
GII.P36
(2)
OC96065_
AF315813
104
Tokyo_
AB684664
105
GII.P37
(2)
Amsterdam3_
KJ194507
106
PunePC24_
EU921353
107
GII.P38
Beijing53931_
GQ856469
108
GII.P39
CHDC5191_
FJ537134
109
GII.P40
(2)
OsakaNI_
DQ366347
110
SaitamaT49_
KJ196277
111
GII.P41
(2)
GoulburnValleyG5175B_
DQ379714
112
HK71_
JX846924
113
GII.PNA1
Loreto1257_
MG495079
114
GII.PNA2
PNV06929_
MG706448
115
GII.PNA3
CHDC2094_
FJ537135
116
GII.PNA4
Sw918_
AB074893
117
GII.PNA5
Dhaka1940_
MG495082
118
GII.PNA6
Arg13099_
KX061540
119
GII.PNA7
No35-Saitama-99-1_
LC342059
120
GII.PNA8
Empangeni10403_
KR904229
121
GII.PNA9
Arg15813_
MK733205
Norovirus genogroup II polymerase phylogenetic tree
The tree was computed from nucleotide sequence alignment using maximum likelihood (ML) method with PhyML software and was plotted and edited in FigTree graphical viewer.
Last updated: March 26, 2024