Human calicivirus
Typing tool
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Reference sequences
Complete genomes
Norovirus genogroup II capsid (VP1)
GenBank
1
GII.1
(5)
Amsterdam3_
KJ194507
2
Ascension208_
JN797508
3
Dillingen391_
AF425767
4
Hawaii_
U07611
5
Picton_
AY919139
6
GII.2
(12)
E3_
AY682552
7
HenrytonSP17_
MF405169
8
KL109_
JX846925
9
MK04_
DQ456824
10
Melksham_
X81879
11
OC97007_
AB089882
12
OsakaNI_
DQ366347
13
PontdeRoide673_
AY682549
14
SaitamaE24_
KF730316
15
SantaRosa1764_
KY865306
16
SnowMountain_
AY134748
17
Vaals_
AB281090
18
GII.3
(13)
109_
MH218579
19
Amsterdam1_
KJ194500
20
Arg320_
AF190817
21
HK71_
JX846924
22
Herzberg385_
AF539439
23
IPH2172-09VG4_
JF697282
24
MX_
U22498
25
Milwaukee009_
JN565063
26
NSW730O_
KT239614
27
RotterdamE1300327_
MF140689
28
RotterdamP1D0_
AB385626
29
SN2000JA_
AB190457
30
Toronto_
U02030
31
GII.4
(2)
CHDC2094_
FJ537135
32
CHDC5191_
FJ537134
33
GII.4 Asia
(2)
Asia_
AB220921
34
Sakai04179_
AB220922
35
GII.4
Den Haag
(3)
DenHaag_
EF126965
36
Minerva_
EU078417
37
Shimane2_
AB541348
38
GII.4 Farmington Hills
(2)
FarmingtonHills_
AY502023
39
Langen1061_
AY485642
40
GII.4 Hong Kong
CUHK-NS-2200_
MN400355
41
GII.4
Hunter
(3)
Chiba04-1008_
AB220926
42
Hunter504D04O_
DQ078814
43
Hunter_
AY883096
44
GII.4
New Orleans
(4)
Hokkaido3_
AB933767
45
NSW001P_
GQ845367
46
NewOrleans_2010-SP-0870_
KX353972
47
NewOrleans_
GU445325
48
GII.4 Osaka
(2)
Osaka_
AB434770
49
PunePC51_
EU921388
50
GII.4
Sydney
(4)
OH16002_
LC153121
51
Sydney_
JX459908
52
WI-467121_
KX354134
53
WoononaNSW3309_
JX459907
54
GII.4
US95-96
(3)
Saitama_
AB112306
55
US95-96_
AF414424
56
US95-96_
AJ004864
57
GII.4 Yerseke
(2)
Isumi060936_
AB294790
58
Yerseke_
EF126963
59
GII.5
(4)
Hillingdon_
AJ277607
60
S63_
AY682550
61
SaitamaT49_
KJ196277
62
SaitamaT52_
KJ196288
63
GII.6
(12)
14-55_
KX158281
64
30443_
KM198534
65
Belgium-4_
MN248516
66
GZ2010-L96Guangzhou_
JX989075
67
Miami292_
AF414410
68
S9c_
KC576910
69
SaitamaU16_
AB039778
70
SaitamaU4_
AB039777
71
Seacroft_
AJ277620
72
Shizuoka8913_
HM633213
73
TCHE99-13646_
GU930737
74
Tokyo_
AB684664
75
GII.7
(5)
236_
MH218692
76
CHDC3936_
JX846926
77
Gwynedd273_
AF414409
78
Leeds_
AJ277608
79
TAKAsanKimchi_
KJ196295
80
GII.8
(2)
Amsterdam9818_
AF195848
81
SaitamaU25_
AB039780
82
GII.9
(2)
GoulburnValleyG5175C_
DQ379715
83
VA97207_
AY038599
84
GII.10
(2)
Erfurt546_
AF427118
85
Mc37_
AY237415
86
GII.11
(2)
Sw43_
AB126320
87
Sw918_
AB074893
88
GII.12
(5)
No35-Saitama-99-1_
LC342059
89
PunePC24_
EU921353
90
SaitamaU1_
AB039775
91
StGeorge_
GQ845370
92
Wortley_
AJ277618
93
GII.13
(5)
Empangeni10403_
KR904229
94
Fayetteville_
AY113106
95
GoulburnValleyG5175B_
DQ379714
96
PunePC25_
EU921354
97
SaitamaT80_
KJ196276
98
GII.14
(6)
Beijing55028_
GQ856465
99
M7_
AY130761
100
Maizuru8533_
GU017903
101
PV-Voelk0017_
KM289171
102
Saga8610_
GU594162
103
SendaiYG99_
KJ196278
104
GII.16
(3)
Hiram_
AY502006
105
Neustrelitz260_
AY772730
106
Tiffin_
AY502010
107
GII.17
(8)
Arg13099_
KX061540
108
Briancon870_
EF529741
109
CS-E1_
AY502009
110
CUHK-NS-682_
KT589391
111
Katrina-17_
DQ438972
112
Kawasaki308_
LC037415
113
Kawasaki323_
AB983218
114
SaitamaT87_
KJ196286
115
GII.18
(2)
OH-QW101_
AY823304
116
OH-QW125_
AY823305
117
GII.19
OH-QW170_
AY823306
118
GII.20
(3)
Leverkusen267_
EU424333
119
Luckewalde591_
EU373815
120
OC071182007_
AB542917
121
GII.21
(2)
IF1998_
AY675554
122
KawasakiYO284_
KJ196284
123
GII.22
(2)
Dhaka1940_
MG495082
124
Yuri_
AB083780
125
GII.23
(2)
Loreto1847_
KT290889
126
Loreto6422_
MG495080
127
GII.24
(2)
EdenPrairie5457_
MG495084
128
Loreto1972_
KY225989
129
GII.25
(2)
Beijing53931_
GQ856469
130
Dhaka1928_
MG495083
131
GII.26
(2)
Leipzig07788a_
MF352142
132
Leon4509_
KU306738
133
GII.27
(2)
Arg15813_
MK733205
134
Loreto0959_
MG495077
135
GII.ancestral
Tokyo68-4_
AB684728
136
GII.NA1
Loreto1257_
MG495079
137
GII.NA2
PNV06929_
MG706448
Norovirus genogroup II capsid phylogenetic tree
The tree was computed from amino acid sequence alignment using maximum likelihood (ML) method with PhyML software and was plotted and edited in FigTree graphical viewer.
Page last reviewed: October 26, 2022