Typing tool

Norovirus genogroup I capsid (VP1)   GenBank
1 GI.1
 (4)
Gothenburg_EU085529  
2 Norwalk_M87661  
3 SRSV-KY-8989J_L23828  
4 V1622-06_AB447406  
5 GI.2
 (3)
Constellation59_AF435807  
6 Leuven_FJ515294  
7 Southampton_L07418  
8 GI.3
 (16)
Akabane991130_EF547396  
9 Beijing54108_GQ856470  
10 Beijing54114_GQ856471  
11 Beijing54660_GQ856472  
12 Beijing55042_GQ856473  
13 CHDC116_JX846929  
14 DesertShield395_U04469  
15 Muenster702_KM289169  
16 OS-32_LC122713  
17 Otofuke_AB187514  
18 Potsdam196_AF439267  
19 ShimizuKK2866_KJ196292  
20 Stavanger_AF145709  
21 V170707_AB447414  
22 VA98115_AY038598  
23 Vesoul576_EF529738  
24 GI.4
 (5)
Beijing55169_GQ856475  
25 Chiba407_AB042808  
26 Groningen_LN854563  
27 Koblenz433_AF394960  
28 Queensarmsleeds92_AJ313030  
29 GI.5
 (6)
AppalachicolaBay318_AF414406  
30 Musgrove_AJ277614  
31 OC020180_LC101825  
32 Siklos-HUN5407_KJ402295  
33 SzUG1_AB039774  
34 Yiwu-CB1_MH443711  
35 GI.6
 (9)
14-BC-1_KP027330  
36 BS5(Hesse)_AF093797  
37 Beijing53997_GQ856463  
38 Beijing55063_GQ856464  
39 Hiroshima48-938_AB354289  
40 No20-Saitama-98-17_LC342057  
41 Sindlesham_AJ277615  
42 VA497_AF538678  
43 WUG1_AB081723  
44 GI.7
 (8)
AlbertaEI404_KU311161  
45 Chiba030100_AJ844469  
46 Dhaka1882_MH130046  
47 IF2036_AY675555  
48 LillaEdetS5b_JN603251  
49 NizhnyNovgorod_FJ383816  
50 Providence_JN899243  
51 Winchester_AJ277609  
52 GI.8
 (2)
Boxer_AF538679  
53 NagoyaKY531_KJ196298  
54 GI.9
 (3)
CAIQ12110628_KF586507  
55 LillaEdetS48_JN183159  
56 Vancouver730_HQ637267  
57 GI.ancestral Tokyo45-5_AB684696  
Norovirus genogroup I capsid phylogenetic tree

 
The tree was computed from amino acid sequence alignment using maximum likelihood (ML) method with PhyML software and was plotted and edited in FigTree graphical viewer.

Page last reviewed: October 26, 2022